Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00460 CTTTATGCTCTGAAAGGTTCTTTCACTTTATGATGTTTGTTAGATTTTATGCTTCACATATTAGATTTCCTTTTGGTTCCATAAAGCTGCACATTTTACTTTTTCTTGTTTACTCCTTTCCATGAAATCACCACTTTTCAATTTTGGTCAAACTCCTTTTCATCTTCTCTTTTACACTTCTATGTATTTTACCTTCTCAAATTTCAGTCCTTTATTCTGTTTCTCTGACACACAAGTTTAGTATCCTAAGTTTTTACATTTGATTTGGCTGTCTAAATTGGGAAATGGGTGGTTCTATTTCTGGTTTTCAATGTGAAATAATGAAGTGTTCTTTTGAAGTTAGCAGTCCTCAGCCATTGATTGGAGCTGACACTTCCTTTTCATCTACTTTTGGATCTTCTGCAACACCTCCTCTATGTGAATTATCCACCTCTTTGGAGAATGAGGGAGTGCAAACCATATCCCATCTTCTTCACGATCCTTCTAGTTTGAGCTTTGATATGTTTGGAAGTGGGAACTTCTCAGAAATGGTGGGTTCTTTTGGCTTTCTAACTGAAGGTGACCACAGCCAGATCCCTAAGATTAAGTGTCCACTTAGTTATGTGTCAAATCTGGATGAAGGACAAACGATCTCACCAAAGAACGATGCGAAGGCTCGGCTCGATTGCGTTAATGAGAATCGAAGAAAATTGGTTCTTGGTTCCAATTCTTCCAGCCCAAATAAGAATGTTGAAGATTACTTTAATGTGGAGCCAACTAATATCCTTAATAAAAATGACAAAACTCTGAAAGTTGAGCATAGAATGAGTGCAAATTTTAACACCAAATCAGATAGTAAACAAGCCAAAGGAGGCTCTCAATGTGTACAAGCTCCCAAGGAGAATTATATTCGTGTTCAAGTACGACGAGTCCGAGCTACTAACCATAGCCTCGCAGAAAGGGTCAGGAGGGAAAAGATCAATGAACGAATGAAGTTGTTGCAAGAGCTTGTTCCTGGATGCAATCAGATTACCGGGAAAACTGTGGTGCTCGACACAATTATTAACTATGTACAATCACTGCAACAACAGGTTGAGTTTCTATCGATGAAACTCGCAAATGTCGGTCCAGAATCAAACTTGGATACAGAGAAGATTCTGCTCACAAATAACTCATACATTTCATCGCCGAATATTCTTCGTACACAAGATGAAGGCATAGACAACGTTCTTGCAATCGATCCTAGATTAACAACATCTCACACAACTCCTCATGTCATGTTTCATCTTCATGGAACAATGCCAACCATTCCAAAAACTACATCTCAGCAACTTTCAAGCCTTTTCAAGATGAGACGATAAGCAGTTCTTCAAATTTCAAGTAGATGATCACAATTATGCCGGTCCAAAAATCAGACATGGATGTGCACAATTATATGTTAGTATTTATCCTTTGTTGGTCACTACAAGGGCAGCAAATTTATTAAGACAGCAATGTAAAGTGGTACTCATTTGTTTGAATTCAAATGTTGTTCTTAATCCTACACATACTTTTCAATCAATCTTACTTTATCTTCTGAA 1559 37.52 MGGSISGFQCEIMKCSFEVSSPQPLIGADTSFSSTFGSSATPPLCELSTSLENEGVQTISHLLHDPSSLSFDMFGSGNFSEMVGSFGFLTEGDHSQIPKIKCPLSYVSNLDEGQTISPKNDAKARLDCVNENRRKLVLGSNSSSPNKNVEDYFNVEPTNILNKNDKTLKVEHRMSANFNTKSDSKQAKGGSQCVQAPKENYIRVQVRRVRATNHSLAERVRREKINERMKLLQELVPGCNQITGKTVVLDTIINYVQSLQQQVEFLSMKLANVGPESNLDTEKILLTNNSYISSPNILRTQDEGIDNVLAIDPRLTTSHTTPHVMFHLHGTMPTIPKTTSQQLSSLFKMRR 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11699679 11702102 + XM_039029697.1 Bhi04g00460 32069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00460 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 209 259 IPR011598 GO:0046983
Bhi04g00460 351 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 31 342 IPR024097 GO:0006355
Bhi04g00460 351 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 31 342 - -
Bhi04g00460 351 SMART finulus 215 265 IPR011598 GO:0046983
Bhi04g00460 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 273 IPR036638 GO:0046983
Bhi04g00460 351 Pfam Helix-loop-helix DNA-binding domain 211 260 IPR011598 GO:0046983
Bhi04g00460 351 Gene3D - 205 280 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00460 Bhi09g03191 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00457 Bhi-Chr4:11699472 Bhi04g00460 Bhi-Chr4:11699679 0 dispersed
Bhi04g00458 Bhi-Chr4:11699674 Bhi04g00460 Bhi-Chr4:11699679 0 dispersed
Bhi04g00460 Bhi-Chr4:11699679 Bhi09g03191 Bhi-Chr9:81814217 2.21E-56 dispersed
Bhi04g00459 Bhi-Chr4:11699677 Bhi04g00460 Bhi-Chr4:11699679 2.36E-91 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
876 PF00010 HLH 2.80E-07 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00460 - - bhj:120075945 686.797