Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01446 TTATTTTGCTATCTTCGTATCGATGGCTAAAAAACGGCCGCACCCAGAACGATGGCTGCTGCCTTTCAAAATTGCCGCGAAACCCATCGTTTCGCTAAAACCCTAAGTCAGCTGTGGCTGTTTTATGATCCCTCCAACTAATCCCCAACTTTGTTCATCTTAATTTCACACTGTGGGAGACGAGAAGACGGCAGGGTTTCTCCCAATCCTGCTCCCATTTCCATGCTTAGCCGTATTCATCAATGGAAGCCATTACATTTTCTGAGGAAATGCGGGATACTGGCTTCTTTTAGTTCCGTGATCCTTGCTAGGCCTTCAGTTTCTGCCGCCCGGGTCGAAGAGGAAACCGTCACTACCTCCTTCTTTCTGAACCAGAACGACCCAGTTCATGAAATTCTCACAGGTTTGAATTCCCTTGGGTTTAGAGCATATGTTGGTGGATGTAGCTTTCAAACTGTTGTTTCTACTTTGAGTGAAACTGTAGTGGATGGCGTTCTTGCTAGCTTGAGAACTCAGAATTCTGAGGTTGCTGTGGCTTTTTTCTATTTGTTAAGAAACGAGTACGGATTTCGGCATTCTGGATTCTCCCAGTTTGCTGTTTCTCATATTTTAGCTGGTAAAGGACGATTCAAGGAGTTGCATTCCATTTTAAAGCATTTGCTTGAGGAGCAAGGGTTGGGTTCTGCGTCTACCTTTTGTGACCTGCTCTTGAACAAATTCAGGAATTGGGATTCAAATGGTGTAGTATGGGATATGCTGGCATTTTCGTACTCTAGACTTGAAATGATTCATGACGCCCTCTTTGTTATTGCAAAGATGAAGGATCTAAATTTACAAGCTTCAGTTCCAACTTATAACTCTCTATTGCATAACTTGAGGCACACTGATATTATGTGGGATATATACAATGAGATCAAAGTTAGTGGAGCTCCTCATGGTGAATATACTACATCAATACTTATACATGGCCTATGCGAGCAATCCAAGTTACAGGATGCGATTTCATTTCTACAGGACAGTAATGAAGTAGATGGACCTTCTATTGTGTCTATTAATACCATTATGTCAAAGCTTTGCAAAGTGGGGCTGATAGATGTTGCGAGGTCATTTCTTTCTTTGATGGTCAAGAATGGACTTCTTCCTGATTCCTACAGTTATAATATTCTTGTTCATGGGTTATGTGTAGCAGGTTCCATGGACGAAGCTCTGGAATTCACAGATGACATGGAAAAGCATGGTGTGGAACCTGATGTAGTAACTTACAACACACTCGCCAAAGGATTTCTCCTGCTTGGTTTGATGAGTGGGGCCCGGAAAGTTGTCCAAAAAATGTTGCTAAAAGGTCTAAATCCAGATCTTGTGACGTATACAATACTGATGTGTGGACATTGTCAGATGGGAAATATTGAGGAAGCTCTTAAACTGCGGCAAGAAACTCTTTCAAGGGGGTTTAAGTTGAATATCATTTCCTACAGTGTGCTACTTAGCTGTTTGTGTAAAGTTGGACAAATAGAAGAAGCATTGACATTGCTTGATGAAATGGAAACTCTATGTTTGAAACCTGATTTTATAGTATATTCAATCCTCATTCATGGCCTCTGCAAGCAAGGGCTTGTTCAAAGGGCTTACCAACTATATGAACAAATGTGCTTGAAGAGAATTTTTCCAAACTACTTTGCTCAACGTGCTGTACTGTTGGGTCTTTTTAAGAATGGAAATATATCTGAGGCAAGAAAATATTTTGATGCTTTGACTCATATGGATCTGATTGAGGATGTTATTTTGTATAATATTATGATTGATGGTTACGTAAGACTTGGTGATATCACTGAGGCTATGCAGCTATATTACAGAATGATTGAAAGGAGGATCACTCCAAGTATTGTCACTTTCAACACCCTTGTCAATGGATTCTGCAGAAGGGGAGACCTAATGGAGGCTCGAAAGATGATGGAAGTCATTAGGTTGAATGGATTGCTACCTAGTGTGGTAACTTATACTACCCTAATGAATGCGTACTGCGAAGTGGGGAACATGCAGGAAATGTTTGATCTTCTTCATGAGATGGAAGCAAACAGTGTCGTTCCAACTCATGTAACTTATACTGTACTAATCAAAGGACTTTGCAGACAGAATAAGATGCATGAATCCCTCCAGTTGCTAGAGTATATGTATGCAAAGGGTCTAATGCCAGATCCGGTCACATATAATACTATTATCCAATGTTTTTGCAAGGGAAGAGACATTGCCAAAGCTTTCCAGCTTTATAATAAGATGTTGCTTCATAATCTTGATCCTACCCAGGTAACTTATAACGTACTTATTAATGGTCTTTGTATGTATGGTGACCTAAAGGATGTGGATCGAATGCTAGTTTCTATGGAGGATCGAAATATTAGCTTGACAAAAGTTGCTTATATGACACTAATTAAAGCACATTGTGCAAAGGGTGAGGTCTCTAAAGCATTAGGGTTCTTCAATCAAATGTTGGCTAAGAGTTTTGTTATTTCGATTAGAGATTATAGCGCTATCATTAATCGGCTGTGCAAAAGAGGTCTAATTACAGAAGCGAAGCACTTCTTTGTTATGATGTTATCAGAAGGCGAAACTCCTGATTCTGAAATTTGTGAGACAATGCTTAATGCTTTCCATCAACAGGGTGATAACAGTTCAGTGTTTGAATTCCTTGCTATGGTGGTTAAATCTGGCTTTATTTCACATTGATCCATTCCTTGCTATGGTGGTTGAATATGGCTTTATTTCACATTGATCCATCTATAAGTGTGATCATTTGATCACATCATATGCTGTTGCAGATAACTTGTCCTTTTTGGCATAAAAGGTTAGCACGAGGTACAGGGTGTAGAGGTTAAATTTCCCTCTCTGGAATATATCAAACTTTATGCCGCAGATAATCAACGAAAGGAAAATCATGTCAATGACCCTCATGGGGCTCTCCCAGCCTGGAGGCTGCAGCAGACTTATTGAGTGGGTGCTTATGACGAGCTGTGCTAACAACTATAAGCTGAGCTTGATTCCTTGCAACTAGTTGTATTCGAGGTAAGGAATTCTCGGAGCCTGAGGAGCATCAGTTTCAGATCTCCCGTCTGTATTTGTTAAATATGGCGGAGGGTTGCTTCGGATCGGAAACCAAATTCTAAAACACCAACCGTGGATACTTGAAGGGATTTAAAGGCCGTTTGGTAAAATTGGGAGAGTTAGGTTGGGTGAGCTTACACTGATAAAATAAAAACAGTGAGATATTAAATTCACCGTTTTACTCCCAATTTAACTTCCTTAATTTGGTACATTTGAAATTACTCTCCCAATTCTTCTCTGTCATTTCTCTTGCTCCCTCATCAGTCTTTTCACATTACTCCCGTTCTTATCTCTTTCATTTTTTTTCATCTGTCTGGTTCGTCTTCTTTATCTCTATTTTTCTTCCTCAGATTCTCTTCTTTTGCTCAATCACATGGGTCTTTTCTTGTTGAATCACTCTCTGCTCTTCTCTGTATATTTTTTTAAGGTTATTTTCATGATTTTACTACGTATGTGATTATTTGTTGTAGATCCAACTAAGTTTCTTCTTCCTCTTTCGGTTTTTTGTTCA 3610 39.56 MLSRIHQWKPLHFLRKCGILASFSSVILARPSVSAARVEEETVTTSFFLNQNDPVHEILTGLNSLGFRAYVGGCSFQTVVSTLSETVVDGVLASLRTQNSEVAVAFFYLLRNEYGFRHSGFSQFAVSHILAGKGRFKELHSILKHLLEEQGLGSASTFCDLLLNKFRNWDSNGVVWDMLAFSYSRLEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDIMWDIYNEIKVSGAPHGEYTTSILIHGLCEQSKLQDAISFLQDSNEVDGPSIVSINTIMSKLCKVGLIDVARSFLSLMVKNGLLPDSYSYNILVHGLCVAGSMDEALEFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLKGLNPDLVTYTILMCGHCQMGNIEEALKLRQETLSRGFKLNIISYSVLLSCLCKVGQIEEALTLLDEMETLCLKPDFIVYSILIHGLCKQGLVQRAYQLYEQMCLKRIFPNYFAQRAVLLGLFKNGNISEARKYFDALTHMDLIEDVILYNIMIDGYVRLGDITEAMQLYYRMIERRITPSIVTFNTLVNGFCRRGDLMEARKMMEVIRLNGLLPSVVTYTTLMNAYCEVGNMQEMFDLLHEMEANSVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLMPDPVTYNTIIQCFCKGRDIAKAFQLYNKMLLHNLDPTQVTYNVLINGLCMYGDLKDVDRMLVSMEDRNISLTKVAYMTLIKAHCAKGEVSKALGFFNQMLAKSFVISIRDYSAIINRLCKRGLITEAKHFFVMMLSEGETPDSEICETMLNAFHQQGDNSSVFEFLAMVVKSGFISH 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42634344 42638685 - XM_039036464.1 Bhi07g01446 39835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 273 307 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 378 412 IPR002885 -
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 403 512 IPR011990 GO:0005515
Bhi07g01446 833 Pfam PPR repeat family 657 705 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat family 587 636 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat family 272 320 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat family 377 426 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat family 518 566 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 448 482 IPR002885 -
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 651 726 IPR011990 GO:0005515
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 581 650 IPR011990 GO:0005515
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 513 580 IPR011990 GO:0005515
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 335 402 IPR011990 GO:0005515
Bhi07g01446 833 SUPERFAMILY HCP-like 362 552 - -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 728 762 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 658 692 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat 444 475 IPR002885 -
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 220 334 IPR011990 GO:0005515
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 308 342 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 553 587 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 763 797 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat 345 375 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat 767 794 IPR002885 -
Bhi07g01446 833 Pfam PPR repeat 730 758 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 623 657 IPR002885 -
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 738 832 IPR011990 GO:0005515
Bhi07g01446 833 Gene3D Tetratricopeptide repeat domain 76 219 IPR011990 GO:0005515
Bhi07g01446 833 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 17 830 - -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 413 447 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 518 552 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 588 622 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 310 344 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 625 658 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 695 727 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 767 798 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 730 763 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 521 553 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 590 623 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 660 693 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 345 378 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 380 413 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 450 483 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 555 588 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 275 309 IPR002885 -
Bhi07g01446 833 TIGRFAM PPR: pentatricopeptide repeat domain 415 448 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 693 727 IPR002885 -
Bhi07g01446 833 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 343 377 IPR002885 -
Bhi07g01446 833 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 17 830 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01444 Bhi-Chr7:42634344 Bhi07g01446 Bhi-Chr7:42634344 0 dispersed
Bhi07g01446 Bhi-Chr7:42634344 Bhi02g01464 Bhi-Chr2:40022535 1.19E-85 dispersed
Bhi07g01445 Bhi-Chr7:42634344 Bhi07g01446 Bhi-Chr7:42634344 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01446 - - bhj:120081514 1658.66