Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi10g00958 ATCATCATTAATTATTTTTGTTTTTGGAGGGTTCGTCCCAATCGTACGAAGGGAAAAAAGCAGCGTGAAAATGGCGAGCCCCGAACTCGAAGCACCAACAAAATTCTTCAGCTTAGCTCACTCTCCACTGCTTTTCATTCTTTCTTCCTCATAAACCCTAATCCTCCATTGCCAAATTCATCTCTTTTTCCTTCTGGGCATTTTCATTAGCCCTCATTCCCCCCCTTAATTTATCTCCTTCTACTCCAGCAATTGCTCGAGTCTTCGCAATTTTCCCACAATTCTTTTCTGCTCTTCGCCCATAAAGGATATGCATATGGAGAATTTATCATCTAGTGATCCATCGCATCAGGTGATGTACGAAAATAGTGATTCGAAGCACTCACAGGATGGGTTGGAGGATGGCTCTCGATGGTATTTTTCTCGGAAGGAATTAGAAGAATTCTCTCCTTCTAAACAAGATGGGATTGACTTGAAAAAGGAGACATATTTACGCAAATCATACTGTACATTTCTCCAAGATTTGGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCAATAATTTTTTGCCATAGGTTTTTTCTTCGGCAGTCTCATGCAAAGAATGACCGAAGGACAATTGCGACAGTGTGTATGTTTCTCGCAGGAAAGGTTGAAGAAACCCCTCGCCCGTTGAAGGATGTTATCATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAAATCAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGGGTTGTTCTCGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCCTACAAACCCCTTGTTGAGGCTATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAAGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAAATGTTAGAACTTTATGAACAAAATCGATTGCCGCCTTCTGGTGAAGCTGATGGAAGCATTGGAGGTGGTCCCACTAATCAAACCCCTACGAAAGCTCCTACCAACAGTGAAGAACGTGGCATAGCGGACAATCATGCACTTGGTGCAGGTGACCAGCCATCAAGAGCAATGCAGAATCATAGCCTTGAAAGTTCAAATGTAGATTTTAGAAGTCCTTCCAATCACAAAACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGCCATCGGCTTTCCATGACAAGGGACACGTTCAAAACTCTGTAAAGCATCAGTCAGAGGGATTGGTTGAGCAAGACCATGGAAATGATGTGAAAATAAATGAAGCAACAAGGGATGCAATGGAACTGAAAGATAAACATGTAATTCGAAATATAGATTTTAGGGAAGGTACACTCGGCAAATCTCAGGACGTTATTAAAAAGATCGATAAGGACAAAGTAAAGGCTGCACTCGAGAAACGAAGGAAGTCTCTTGGCAGCATGACCCAGAAAAAAGAATTGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGCTGGCAGTGAGAAAAACAAGCGAGAACAGAGGCAAAGTTGGAATAAGTCATCGAATAAACAAGAATACGAAGATTCGTATCAAGACAAACATCGAGAGGACGATAAAGATGAGCATCCTCAACGAACGCGACAGTTGTCATATAATCTAGATTCTAGTAACATAGAAGAAGGGGAGTTTGCAAATGCTAATGAAGTTGGTTATGGGTATCAAGATTCCCCAAAGTCGAACAGTCGTAAGAGAGGCAGGGAGCTAACAGGATAGAGCTTTTGAAGGGAAAGCCAAGTTAAGTTGTGTCGTGTCGGTGCAGCTGGTCAAACAGAGAGGGACCACGAGAATCGTATACCGGAAAATTATGTTTGAGAAGTTTCACCAGAGGGTTTTTTTTTTTTTTTTTTTTTTTTT 2104 42.02 MHMENLSSSDPSHQVMYENSDSKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEADGSIGGGPTNQTPTKAPTNSEERGIADNHALGAGDQPSRAMQNHSLESSNVDFRSPSNHKTGSESKVRQEMEPSAFHDKGHVQNSVKHQSEGLVEQDHGNDVKINEATRDAMELKDKHVIRNIDFREGTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAAGSEKNKREQRQSWNKSSNKQEYEDSYQDKHREDDKDEHPQRTRQLSYNLDSSNIEEGEFANANEVGYGYQDSPKSNSRKRGRELTG 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19620294 19634561 + XM_039045634.1 Bhi10g00958 47299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi10g00958 550 MobiDBLite consensus disorder prediction 456 478 - -
Bhi10g00958 550 Pfam Cyclin, N-terminal domain 36 176 IPR006671 -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 456 550 - -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 284 301 - -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 339 378 - -
Bhi10g00958 550 SMART cyclin_7 182 267 IPR013763 -
Bhi10g00958 550 SMART cyclin_7 67 169 IPR013763 -
Bhi10g00958 550 Gene3D - 177 277 - -
Bhi10g00958 550 PANTHER CYCLIN 3 316 IPR043198 GO:0006357|GO:0016538
Bhi10g00958 550 PANTHER CYCLIN 315 493 IPR043198 GO:0006357|GO:0016538
Bhi10g00958 550 MobiDBLite consensus disorder prediction 318 338 - -
Bhi10g00958 550 CDD CYCLIN 176 237 IPR013763 -
Bhi10g00958 550 SUPERFAMILY Cyclin-like 32 177 IPR036915 -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 1 31 - -
Bhi10g00958 550 SUPERFAMILY Cyclin-like 178 274 IPR036915 -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 485 507 - -
Bhi10g00958 550 PANTHER - 315 493 - -
Bhi10g00958 550 PANTHER - 3 316 - -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 273 378 - -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 1 22 - -
Bhi10g00958 550 MobiDBLite consensus disorder prediction 508 522 - -
Bhi10g00958 550 Gene3D - 26 175 - -
Bhi10g00958 550 CDD CYCLIN 61 132 IPR013763 -
Bhi10g00958 550 PIRSF Cyclin_L 33 512 - -
Bhi10g00958 550 PIRSF Cyclin_L 451 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00195 Bhi-Chr4:4739677 Bhi10g00958 Bhi-Chr10:19620294 5.85E-116 dispersed
Bhi10g00958 Bhi-Chr10:19620294 Bhi12g01731 Bhi-Chr12:55945440 9.81E-75 dispersed
Bhi10g01768 Bhi-Chr10:44535352 Bhi10g00958 Bhi-Chr10:19620294 8.65E-22 dispersed
Bhi10g00957 Bhi-Chr10:19620294 Bhi10g00958 Bhi-Chr10:19620294 0 tandem
Bhi10g00958 Bhi-Chr10:19620294 Bhi10g00959 Bhi-Chr10:19620294 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi10g00958 K15188 - csv:101220862 1024.23