Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00359 ATGGATTCCCACTCCCTTCCCCCTCCTTTCCACACCCGTGATTTCCATCTCCAACAACACCAATTCCATAACAACAACAACAATAACAACTCCGAAGAAGAACACAGCACCACCACCACCCGCCTCAAACGCGACCGCGACGATGACACCAACAACTCCACCGGAGACGCCGCCCCCGGCCCCGCCGACGGAGAAATCACTCGACGCCCTAGAGGTAGGCCTGCTGGATCCAAAAACAAACCCAAACCCCCTATCATTATCACTCGCGACAGCGCCAACGCCCTTCGTACTCACGTCATCGAAGTCACCGATGGCTGTGATATAGTCGACAGCGTCGCTACCTTCGCTCGTCGTCGCCAACGTGGGGTTTGTATTATGAGTGGTACTGGTACCGTCACCAACGTTACTCTCCGTCAACCCGCTTCCCCTGGTGCAATTGTTAACTTACATGGCCGGTTTGAGATCTTATCTCTTGCCGGCTCTTTTCTTCCTCCTCCCGCTCCTCCCGCTGCTACTACTTTAACTATTTATCTCGCTGGCGGTCAAGGTCAAGTCGTCGGCGGTAGCGTCGTTGGTACTTTAATCGCTTCCGGTCCTGTAGTTATCATGGCTGCTTCCTTTAGTAACGCTGCTTATGAACGGCTTCCGTTGGAGGATGACGACCAGCCACCGCTTCCGTCGTTGCAAGCCGGCGGCGGAATTGGGTCTCCGGATGAAGTTGGACAGTCACAAACGGCGCATCATCAACAACAGCAACAAAATCAACAACAGCAGCAACTTCTTAACGACGGGAATGCGCCGTTATTTCACGGTTTGCCTCCGAATCTCTTGAATTCAATTCAAATGCCACCGTCTGAAGCGGCGTATTGGGCAAATTCCCGTCCTCCGTACTAA 894 53.24 MDSHSLPPPFHTRDFHLQQHQFHNNNNNNNSEEEHSTTTTRLKRDRDDDTNNSTGDAAPGPADGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIVDSVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVNLHGRFEILSLAGSFLPPPAPPAATTLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLEDDDQPPLPSLQAGGGIGSPDEVGQSQTAHHQQQQQNQQQQQLLNDGNAPLFHGLPPNLLNSIQMPPSEAAYWANSRPPY 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11385206 11386099 - XM_039020104.1 Bhi12g00359 52171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00359 297 MobiDBLite consensus disorder prediction 217 280 - -
Bhi12g00359 297 MobiDBLite consensus disorder prediction 36 52 - -
Bhi12g00359 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 209 IPR005175 -
Bhi12g00359 297 MobiDBLite consensus disorder prediction 19 35 - -
Bhi12g00359 297 MobiDBLite consensus disorder prediction 238 264 - -
Bhi12g00359 297 MobiDBLite consensus disorder prediction 1 87 - -
Bhi12g00359 297 CDD DUF296 96 162 IPR005175 -
Bhi12g00359 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 223 - -
Bhi12g00359 297 Gene3D - 95 223 - -
Bhi12g00359 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 297 IPR014476 GO:0003680
Bhi12g00359 297 PIRSF ESCAROLA 10 297 IPR014476 GO:0003680
Bhi12g00359 297 ProSiteProfiles PPC domain profile profile. 92 231 IPR005175 -
Bhi12g00359 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 3 297 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi11g00213 Bhi12g00359 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00359 Bhi-Chr12:11385206 Bhi12g02623 Bhi-Chr12:81027000 2.48E-85 dispersed
Bhi12g00359 Bhi-Chr12:11385206 Bhi01g00104 Bhi-Chr1:2168956 1.68E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00359 - - csv:101209716 470.314