Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01314 ATGTTGACAGGGCTACTGGCAAAACTGCTGGAGGAGCTACTAAATGGACTGCTGGAAGATCCATATGCTTCCTTAGATCGTCCACGAGCAACTGTTGAATGCTGTGAAACTCTTCAATTTGTCTACTCATTCCTTCAATTTGGCTACCATAGGCTGCAACCGAGGAAGCAAGCAAAGGATGCCTTGAAGACACTCAAAAAGCGCCTGGCCATTAAAAATCCTAAAATACAACTTCTTGCTCTTTTCGCATTGGAGACTATCAGCAAAAATTGTGGGGAAAATGTATTTCAATTGATCATTGAGCGTGATATTCTGCACGAAATGGTTAAAATAGTAAAGAAGAAGATGCCTTGCGTTGTGTCTTCTAGTCCTTGTGAGCCTGACTTTCATGTAAAGGAAAAGATATTGAGTTTGATTGATGCATGGCAAGAAGCTTTTGGGGGACCAAGGGGTAGATATCCTCAGTATTATGCAGCCTACAATGAATTAAAGAGTGCGGGAGTTGAATTTCCACCCCGAGAAGACAATGGAGTGCCATTTTTCACTCCACCCCAGACCCAACCTATAGTTCATCATCCTGACTCAACCTACGATGACGCTGCACTTCAGGCATCTCTTCAGTCTGATGCATCTGGCCTTACCTTGCCAGAAATTCAGACAGCGCAGGGATTGGCAGATGTGTTAATGGAAATGCTTGGTGCTTTGGATCCTAAGAAACCAGAGAGTGTGAAGGAAGAAGTGATAGTGGACCTCGTAGAGCAGTGCCGTTCATACCAAACACGTGTGATGCTACTCGTGAATGAGACTGCAGATGAGGAACTTTTGTGTCAGGGATTGGCGTTGAATGACAGTTTGCAGCGTGTTCTTGGTCGACATGATGACATTTTGAATAGAACCTCCAGTGCAGGGGTCAGAGAAACTGAATCTTCAGTCTCGCCGATGTTGAATTTGAACCACGAAGATGATGATTCGGAAGATGAGTTTGCCCAGCTAGCTCATAGGGCATCTAGAGAGAGTTTGCAAGAAAAGAGCAGGAGATCAGCCAATGGCAGCTCTGATCAAGTTCCAATCAACCCATTACTTCCTCCCCCCTCATCTTCAAAGACTCCTGCTTCTTCTCGTGACACTCCCATTGTGGACTATCTAAGTGGAGACCATTATAAGTCGAAAGAATCCATCAAGACCTCAAGACCCATATCTGCCCTTCCTCTCCGCTCTGACTCACCTTCAACTGAGCCATTGAATTCAACTCTATCTTCTTCTTCGCCTCCTTATTATCGTCCCAAAACCCCCCTCATATCGCCCTTCACCGGCCTTCCTGTTTATGATGAGCCTTCTCCAAGGGACAGATCCCCAGACCCACTACCTCCGGCTCCGTGGGATGGTCGGTCACCAGCTTCACTCCCTCCTCCACCCTCCAATTATAATAAGAGACAGCAGTTTTTCGAGCAAAAACAAGGTCATGGGGGAAGTTCTCATTCAAGCAGTGAATTTGGTTCTTCATATGACAGCTTAGTCGGACCAACTCGAAGCCTCTCACTCAATCCTTCTTCACCGACCAAACAGGAAAAACCAGAAGACGCCCTCTTCAAAGATCTCGTTGATTTTGCAAAAGCCAAGTCGTCTTCGCCCTCGAAAACCAACAAATCTTACTAG 1656 45.83 MLTGLLAKLLEELLNGLLEDPYASLDRPRATVECCETLQFVYSFLQFGYHRLQPRKQAKDALKTLKKRLAIKNPKIQLLALFALETISKNCGENVFQLIIERDILHEMVKIVKKKMPCVVSSSPCEPDFHVKEKILSLIDAWQEAFGGPRGRYPQYYAAYNELKSAGVEFPPREDNGVPFFTPPQTQPIVHHPDSTYDDAALQASLQSDASGLTLPEIQTAQGLADVLMEMLGALDPKKPESVKEEVIVDLVEQCRSYQTRVMLLVNETADEELLCQGLALNDSLQRVLGRHDDILNRTSSAGVRETESSVSPMLNLNHEDDDSEDEFAQLAHRASRESLQEKSRRSANGSSDQVPINPLLPPPSSSKTPASSRDTPIVDYLSGDHYKSKESIKTSRPISALPLRSDSPSTEPLNSTLSSSSPPYYRPKTPLISPFTGLPVYDEPSPRDRSPDPLPPAPWDGRSPASLPPPPSNYNKRQQFFEQKQGHGGSSHSSSEFGSSYDSLVGPTRSLSLNPSSPTKQEKPEDALFKDLVDFAKAKSSSPSKTNKSY 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 50287278 50297023 - BLOR01314 Blo01g01314 55754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01314 551 PANTHER TOM1-LIKE PROTEIN 4 56 550 - -
Blo01g01314 551 PIRSF TOM1 53 551 IPR014645 -
Blo01g01314 551 ProSiteProfiles GAT domain profile. 209 297 IPR004152 GO:0035091|GO:0043130
Blo01g01314 551 Pfam GAT domain 224 296 IPR004152 GO:0035091|GO:0043130
Blo01g01314 551 MobiDBLite consensus disorder prediction 301 317 - -
Blo01g01314 551 Pfam VHS domain 55 166 IPR002014 GO:0035091|GO:0043130
Blo01g01314 551 SMART VHS_2 23 167 IPR002014 GO:0035091|GO:0043130
Blo01g01314 551 MobiDBLite consensus disorder prediction 394 427 - -
Blo01g01314 551 CDD GAT_GGA_like_plant 217 295 - -
Blo01g01314 551 Gene3D - 50 180 IPR008942 -
Blo01g01314 551 SUPERFAMILY ENTH/VHS domain 56 171 IPR008942 -
Blo01g01314 551 Gene3D - 206 304 IPR038425 -
Blo01g01314 551 MobiDBLite consensus disorder prediction 326 344 - -
Blo01g01314 551 SUPERFAMILY GAT-like domain 175 296 - -
Blo01g01314 551 MobiDBLite consensus disorder prediction 451 472 - -
Blo01g01314 551 MobiDBLite consensus disorder prediction 473 522 - -
Blo01g01314 551 ProSiteProfiles VHS domain profile. 54 171 IPR002014 GO:0035091|GO:0043130
Blo01g01314 551 CDD VHS 57 165 - -
Blo01g01314 551 PANTHER TOM1-LIKE PROTEIN 56 550 IPR044836 GO:0035091|GO:0043130|GO:0043328
Blo01g01314 551 MobiDBLite consensus disorder prediction 301 527 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01314 Blo07g01352 CCT
Blo01g01314 Blo12g01115 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01314 Blo-Chr1:50287278 Blo12g00760 Blo-Chr12:25937278 6.24E-88 dispersed
Blo16g00574 Blo-Chr16:23462746 Blo01g01314 Blo-Chr1:50287278 7.17E-10 dispersed
Blo01g01314 Blo-Chr1:50287278 Blo12g01115 Blo-Chr12:28802490 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01314 - - rcu:8270940 573.548