Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01480 ATGGGCTCCGATGGCATCTATACTGGTCTTGTTCTTGGACTGATCAATTCCATCAATTACCCCAAGGAAGAGAAATTTATCCAATCAATTCCCGAGATAAACAAGAATCCATCATCAAAATTTGACAACACTTTTCTCACACTAGCCCTCTCCGACGAGACCAACCGACCTGCTACAATCTCCGACGTTTATAAGCAACTTACCGGCGAACCATATGATATACTGCTGCAGGCTTCTTCTGCTAGCGCTGTATCATCGTTTTCAAACTCCTCCAGTTTCAAGCGCGATAGAGACTTCTGCGATAGTGATGAGATAGAAGCAGAGACCGAGGTAGGCATACAGCCAATCTCTTCTAAGGTCAGTGAGGAAGAAGAAGATGGCACTGGCAGTCCGAGAAAAAAACTTAGACTCACAAAAGATCAGTCCGCCATTTTAGAGTTCAGCTTCAAAGAGCATGCAACTCTAAACCACAAACAAAAACAAGACTTGGCAAGAAAGTTGAGTCTAAGCACAAGACAAGTGGAAGTCTGGTTTCAAAACAGGAGGGCGAGAACCAAGTTGAAGCAAACAGAAGAGAGCTGCGAGCTGCTGAAGAAATGCTGCGAATCACTAACAGAAGAAAACAAAAGGCTAAAGAAAGCGCTTCAAGACATGAAAACACTAAAATCAGCTCCTCATCCGCCATTTTACATGCAGCTCAAATCAGCAACTCTCTCCATTTGCCCTTCTTGCGAGGGACTTTGCAGCGTCGGCGATGGGTCATCTCCCACGAGCACTCTCTCAGGCACTCCAAACGTTGGTTAA 804 45.02 MGSDGIYTGLVLGLINSINYPKEEKFIQSIPEINKNPSSKFDNTFLTLALSDETNRPATISDVYKQLTGEPYDILLQASSASAVSSFSNSSSFKRDRDFCDSDEIEAETEVGIQPISSKVSEEEEDGTGSPRKKLRLTKDQSAILEFSFKEHATLNHKQKQDLARKLSLSTRQVEVWFQNRRARTKLKQTEESCELLKKCCESLTEENKRLKKALQDMKTLKSAPHPPFYMQLKSATLSICPSCEGLCSVGDGSSPTSTLSGTPNVG 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54162228 54163247 - BLOR01480 Blo01g01480 55920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01480 267 Pfam Homeodomain 132 186 IPR001356 GO:0003677
Blo01g01480 267 PANTHER - 77 257 - -
Blo01g01480 267 CDD homeodomain 131 189 IPR001356 GO:0003677
Blo01g01480 267 MobiDBLite consensus disorder prediction 119 135 - -
Blo01g01480 267 SUPERFAMILY Homeodomain-like 122 189 IPR009057 -
Blo01g01480 267 SMART HOX_1 130 192 IPR001356 GO:0003677
Blo01g01480 267 Coils Coil 187 224 - -
Blo01g01480 267 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 77 257 - -
Blo01g01480 267 SMART halz 188 233 IPR003106 GO:0006355|GO:0043565
Blo01g01480 267 Gene3D - 125 195 - -
Blo01g01480 267 ProSiteProfiles 'Homeobox' domain profile. 128 188 IPR001356 GO:0003677
Blo01g01480 267 ProSitePatterns 'Homeobox' domain signature. 163 186 IPR017970 GO:0000981|GO:0006355
Blo01g01480 267 MobiDBLite consensus disorder prediction 112 135 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01480 Blo12g01004 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01480 Blo-Chr1:54162228 Blo06g00035 Blo-Chr6:723435 9.87E-59 dispersed
Blo01g01480 Blo-Chr1:54162228 Blo12g01004 Blo-Chr12:28027205 1.57E-131 wgd
Blo01g01480 Blo-Chr1:54162228 Blo04g01103 Blo-Chr4:17324118 6.80E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11923 PF00046 Homeodomain 1.30E-16 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01480 K09338 - jre:109008842 214.542