Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01603 ATGGTTGGTATGGCTCAACTGGTACGGCTGCTCAGGCAATGGCCGATGGTACAGAGCCATTGCTGTAGCTCCTTTAAATTCTATCACTTCCTTTCTTCCTCCTCTCTACCTCTAGGAAGCGGAAATAATTTTCACGCACTCTCGTTTTCCAATGGACTCTCTGCTTCTTCTCGTCGGGACATTCATTGCAGATCAAGAGGGCCCAAATTGTCCAACTCTTCCATGGCGTCCAATCTTCTGGTTGATGAGACCAGCGATTCAGATTCTGATGCGAAGAAAAGTCGTAATCAGCTCAAACGCAACGCCCGGCGTGCCGTCCGTTGGGGAATGGAGCTTGCTTCCTTGTCTACTCCTCAAATTAAACGTATTCTGATAGCGGTGTCCCTTGAGGAAGATGTGCTCGATGCTCTAATGCTTGTGAAGAGACTAGGACCCGATGTCCGAGAGGGAAAACGCCGGCAATTCAATTATATCGGGAAACTGCTCCGGGATGTGGAACCTGAATTGATGGATGCTTTAATTCAGGCCACGAAAGAGGGTGACCTGAGGAAACTGCAGACTTTATCTGGATCGAGGACAATGGTGGAGGAAGATAGTGATGAAAACCCGGAAGAATCTGATTACCTTGAAGGAGAGGGTTCTCAAATTGAAATGGTAAATAGATGGCTTGACGGCTTGATAAGAAAGGACATCAGCATCAGCAATGAACTTTATTCAATCAGTCGTGTGGAATTCGATCGTCAGGAGTTGCGTAAACTTACGCGTAAAGTGCATTCGATTCAAGAGCTTGGGGATGTAAATCAAGACAACGATGCAAATGTAGAAGTGGCAATGATAGGCGCCAAAAGGGAGATTACAACACAACATCCACCGCATGGTGGAAAATTCAATACTCTGCCACGAAAATGCATATTTTCTATTGGAGTGTTTTCAACGACATTCAAGATAATAAACCAATGCGATTACACAGTTTGGCCTGGAATTTTATCCAATGCCGGAGTTCCACAGTTTTCCACCACTGGCTTCGAGCTTCAGACTGGAGAGTCCCAAGTCCTCACTGCGCCGACGTCGTGGGGTGGTCGATTCTGGGGAAGGACTTACTGCTCCGAAGATTCAACCGGAAAGTTCTCCTGCGTAACAGGTGATTGTGGCTCTAATAAGATTGAATGCGCTGGCAATGGCGCCGCACCGCCGGCTACTCTAGCCGAATTCACTCTAGACGGTGCCGGTGGATATGATTTCTTCGATGTTAGCTTAGTCGACGGGTACAACCTCCCTATGCTGGTGGTTCCCCAGGGAGGCACCGGGCAGAATTGCACGAGTACAGGGTGCGTGGTAGACCTGAACAGCGCTTGCCCATCGGAGCTGAAGGTGACGAGCGTGGACAGTAGCCAGAGCGTGGCTTGTAAGAGCGCTTGCGAAGCATTTGGGCAACCGCAGTATTGCTGCAGCGGAGCGTACAATTCACCCAATACATGTCAGCCGTCGTCTTACTCTCAAGCGTTCAAAACCGCTTGCCCACGTGCATACAGCTACGCCTACGACGATAAGACGAGTACCTTCACATGTGCGTCTGCCGATTATGTGATCACTTTCTGCCCAACTCCGACGACCAGCCAAAAATCATCGCAGGGTCAGAGCGGGCAGACTACGGCCGCCAATGGCACCATGGTATACGAAGGGGCTGAGTTGTACGAGAATGGCGCATCGCCACTCTCCACAATTGCCAATTCCTTTGTCGGTGTGCTGGCCCTCGCACTTGCAATTCAGCTCGTTTATCAGACGGTCTAA 1791 49.64 MVGMAQLVRLLRQWPMVQSHCCSSFKFYHFLSSSSLPLGSGNNFHALSFSNGLSASSRRDIHCRSRGPKLSNSSMASNLLVDETSDSDSDAKKSRNQLKRNARRAVRWGMELASLSTPQIKRILIAVSLEEDVLDALMLVKRLGPDVREGKRRQFNYIGKLLRDVEPELMDALIQATKEGDLRKLQTLSGSRTMVEEDSDENPEESDYLEGEGSQIEMVNRWLDGLIRKDISISNELYSISRVEFDRQELRKLTRKVHSIQELGDVNQDNDANVEVAMIGAKREITTQHPPHGGKFNTLPRKCIFSIGVFSTTFKIINQCDYTVWPGILSNAGVPQFSTTGFELQTGESQVLTAPTSWGGRFWGRTYCSEDSTGKFSCVTGDCGSNKIECAGNGAAPPATLAEFTLDGAGGYDFFDVSLVDGYNLPMLVVPQGGTGQNCTSTGCVVDLNSACPSELKVTSVDSSQSVACKSACEAFGQPQYCCSGAYNSPNTCQPSSYSQAFKTACPRAYSYAYDDKTSTFTCASADYVITFCPTPTTSQKSSQGQSGQTTAANGTMVYEGAELYENGASPLSTIANSFVGVLALALAIQLVYQTV 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55891279 55897617 + BLOR01603 Blo01g01603 56043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01603 596 Pfam Thaumatin family 318 534 IPR001938 -
Blo01g01603 596 SUPERFAMILY Osmotin, thaumatin-like protein 312 534 IPR037176 -
Blo01g01603 596 CDD YjgA-like 93 264 IPR006839 -
Blo01g01603 596 Gene3D - 104 181 IPR023153 -
Blo01g01603 596 Pfam Protein of unknown function (DUF615) 92 266 IPR006839 -
Blo01g01603 596 MobiDBLite consensus disorder prediction 81 100 - -
Blo01g01603 596 CDD TLP-PA 313 533 - -
Blo01g01603 596 Gene3D Thaumatin 312 534 IPR037176 -
Blo01g01603 596 PRINTS Pathogenesis-related protein signature 413 429 IPR001938 -
Blo01g01603 596 PRINTS Pathogenesis-related protein signature 361 372 IPR001938 -
Blo01g01603 596 PRINTS Pathogenesis-related protein signature 524 533 IPR001938 -
Blo01g01603 596 PRINTS Pathogenesis-related protein signature 313 325 IPR001938 -
Blo01g01603 596 ProSiteProfiles Thaumatin family profile. 311 534 IPR001938 -
Blo01g01603 596 MobiDBLite consensus disorder prediction 190 211 - -
Blo01g01603 596 SMART tha2 314 534 IPR001938 -
Blo01g01603 596 PANTHER BNAA02G17480D PROTEIN 306 556 - -
Blo01g01603 596 SUPERFAMILY PSPTO4464-like 104 265 IPR023153 -
Blo01g01603 596 PANTHER OS03G0233200 PROTEIN 306 556 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01603 Blo18g00229 CCT
Blo01g01603 Blo18g00229 ECH
Blo01g01603 Blo12g01115 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01603 Blo-Chr1:55891279 Blo12g00882 Blo-Chr12:27019113 9.02E-170 dispersed
Blo17g00815 Blo-Chr17:26326885 Blo01g01603 Blo-Chr1:55891279 3.00E-75 dispersed
Blo02g00698 Blo-Chr2:21307192 Blo01g01603 Blo-Chr1:55891279 3.88E-111 transposed
Blo05g00709 Blo-Chr5:24415784 Blo01g01603 Blo-Chr1:55891279 1.82E-113 transposed
Blo01g01603 Blo-Chr1:55891279 Blo16g00082 Blo-Chr16:2209602 3.43E-95 wgd
Blo01g01603 Blo-Chr1:55891279 Blo18g00776 Blo-Chr18:22182084 3.21E-131 wgd
Blo01g01603 Blo-Chr1:55891279 Blo04g00882 Blo-Chr4:10098299 1.27E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01603 - - zju:107420415 436.802