Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00829 ATGAAAGGTAAGAGCAGTGCCATTAATTCACTTCCTGAAATTGTGAATATTGGGCAAGGATCTGTTTCCAGTACTGCTGTAATGAGTCAGCAAAATGTTCCAGCTAATGTTACTCCTGTGGAAAACCGGTTGTCAAATTATATGATCTCATCTGATGAAACATGTACCCATTCTGCTAGTCATGGTGCTCAGAGCTTTGATGGTTGTTATTCTGATGAATCTAGTTACAGGATTAATTTGCAGAATGATATAGACAATGAACTGCTAAAAAGGGAGCATTTTTGGTCTCCCTTAAATGCCTCTTCTGGGAATAGCCCAGAAGAGAGACAACTAGGGGCATCTAACTCCTTTTTTCGTGGGAGAACTGATTTTGGGTCCAGTAAATATGAAATTAGAGACAGGCCATTGTTTTCACAAGGTTCGACCTCCAATGTTACTTATCATAATGAAAGTCCAGATGCTGAGTATGTTGGAAATAGCAACATAGGCAGGCTTGAAGTTGGATCTGGTTGTTCTAATTCATACAAGTCAAGTCAATCAGAAATAGGGCAAACTTCTTCTGTTTCCTTTTGTCGGAATTCATTTGGAGACACTCATAATATGATAGTGGAAAATGATGGTGGGCCCAGTTCTTCAGGTTCATGGGGATTGTCCTGCAAGAGAAAAGCCCTTGAAGGAACTTCCAGGCAATTTTGTTCTGGTGGAAGTTCTGGCTCCTTCCCACAGCCAGAACAGGATATATTACGCACTGGCACTGCTTTTTCTGTACCTTCTAGCAGTTTAAGATTATCCCCTCCTGCTCAGGTATCTCATTGCACTGGTCTTCCTGAGCTGCAGAACTCAAGCATTAGTGCTAGTGGAATGAAAACAGTTTCTGATGTCTACACTTCTTCAAGTGTTACGAATAATTTTGAGAGATCTTTGAGTGATTTGGGAAGAATGGCTGCTTTGAGGACTTCACAGGACTATGTGCCATTTAGTATATTATCTGCCGGAATCGCAAGGCACCAAAGCCCCCCTTCATTTAGAGATTCTGTGGAGAGATCATCAGCAATTTCAGCTGTCAGCTCAGGAGGAACCCAAGGACTTTCTCATGGTAATGAAGTTCCTGGGATTTCGAGATGTTCTCATCCTTTCACCTGGGATGGGGGTTGCACTTCAAGAGTCGAAAGCTTGTCAAGTTTATCTGGACATGGAAGTCTACATGAAGACTTAAATCTAGGTTGTTATTCACGAAACAATACAGAGTATCACGTAGTTTTACCGGCAACTGAGACAAGAAACTCAACTCATGATTCAACTAGCTGGAGTTTAGGACTTGGAAACGTAAGCAATTCATTTTGCAGTCCTTCTACTTCTCAAACTAGCCCTAGTTCTAGCATTTGTTCTTTACCAAATCCAGCATTAATTTCACCCAACCCTCCTAGAGAAAATCCAGGAAGGTTGTTAGAATTCACACCTTGGTCTTTGTTTCCTTCTACTGATGCTGAATCTGGAGTTCCTAGTGGTCACTTTTATCCATCACCTGTAGCTCCTGCTTCTGCTCGGGATGCAACTCTGTCATCTGCACCTAATAGCCATAGGTATCATCAATCTTATCCTAGGTCTGCGTACTTTCTGGAGAGACTGGGTGATGATATTTCAGGTACTACACATTCATTACGCACTTTAGCTGCTCACACTGAGGGCAGGCGCCAACTAATATCTGAGATTCGCCAAGTCTTGACTGTCATGCAAAGGGCTGAAAACTTGGCAGCTGAGGATCATATGTTGTTTGACCCATTCATATACCATGGTATGGCTGAGATTCATGATAGGCATAGGGACATGCGCCTCGATGTTGACAACATGTCCTATGAGGAATTGTTGGCACTAGAAGATCGCATAGGAGATGTTAGCACAGGACTTAGTGAAGATGTGATTTTGAAGATCTTGAAACAACAAAAGTACGAGTTACTCAAAACGCCAACTCCTCCAGATTTGGAACCCTGCTGCATCTGTAAGCGGTCAAAATTACAGGAGGAATATGCTGATGCCGATATTGTTGGGACGTTAGATTGTGGGCACAATTTCCATTCCAACTGTATCAAGCAGTGGCTTGTGCTGAAGAACCTGTGTCCCATTTGTAAAACAACAGCCTTGCCTAAATGA 2151 42.35 MKGKSSAINSLPEIVNIGQGSVSSTAVMSQQNVPANVTPVENRLSNYMISSDETCTHSASHGAQSFDGCYSDESSYRINLQNDIDNELLKREHFWSPLNASSGNSPEERQLGASNSFFRGRTDFGSSKYEIRDRPLFSQGSTSNVTYHNESPDAEYVGNSNIGRLEVGSGCSNSYKSSQSEIGQTSSVSFCRNSFGDTHNMIVENDGGPSSSGSWGLSCKRKALEGTSRQFCSGGSSGSFPQPEQDILRTGTAFSVPSSSLRLSPPAQVSHCTGLPELQNSSISASGMKTVSDVYTSSSVTNNFERSLSDLGRMAALRTSQDYVPFSILSAGIARHQSPPSFRDSVERSSAISAVSSGGTQGLSHGNEVPGISRCSHPFTWDGGCTSRVESLSSLSGHGSLHEDLNLGCYSRNNTEYHVVLPATETRNSTHDSTSWSLGLGNVSNSFCSPSTSQTSPSSSICSLPNPALISPNPPRENPGRLLEFTPWSLFPSTDAESGVPSGHFYPSPVAPASARDATLSSAPNSHRYHQSYPRSAYFLERLGDDISGTTHSLRTLAAHTEGRRQLISEIRQVLTVMQRAENLAAEDHMLFDPFIYHGMAEIHDRHRDMRLDVDNMSYEELLALEDRIGDVSTGLSEDVILKILKQQKYELLKTPTPPDLEPCCICKRSKLQEEYADADIVGTLDCGHNFHSNCIKQWLVLKNLCPICKTTALPK 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29905024 29914171 + BLOR10559 Blo02g00829 57059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00829 716 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 714 - -
Blo02g00829 716 CDD RING-H2_TTC3 663 710 - -
Blo02g00829 716 SUPERFAMILY RING/U-box 663 714 - -
Blo02g00829 716 Pfam Ring finger domain 664 710 IPR001841 -
Blo02g00829 716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 631 714 IPR013083 -
Blo02g00829 716 ProSiteProfiles Zinc finger RING-type profile. 664 710 IPR001841 -
Blo02g00829 716 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 714 IPR045191 GO:0061630
Blo02g00829 716 SMART ring_2 664 709 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00829 Blo15g00751 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00829 Blo-Chr2:29905024 Blo18g00646 Blo-Chr18:11570892 6.00E-62 dispersed
Blo15g00752 Blo-Chr15:25514105 Blo02g00829 Blo-Chr2:29905024 0 transposed
Blo17g00874 Blo-Chr17:28800371 Blo02g00829 Blo-Chr2:29905024 1.12E-73 transposed
Blo15g00751 Blo-Chr15:25503272 Blo02g00829 Blo-Chr2:29905024 2.22E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00829 - - qsu:112033740 592.423