Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00993 ATGCATCATGGAATGACGGACTACCGGCTACCGGCATCGACGATGTCGAATCTCTGGACCGATGAGACGTCGACGATGAACTCCTTCATCAGCTCGGATTTCTTAACATGCGACCCTTTCAAAACAGTATCTCTCTCACAGCCGTCGCCTACGGGGCGAACCTTCGGCCAAGAGACTCTGCAACACCGCCTTCAGGCTCTAATCGAAGGCGCTCACGAAAACTGGACCTATGCCATTTTCTGGCAGTGTTCTTATGATTTTTCCGGTACGTTGGTTTTAGGATGGGGAGACGGATATTACAAAGGCGAGTATAGAAAGAGAAAAGGGAAAGTGAAGATGACGATGACGTCTCCGGCGGAGCAAGAGCATCGAAAGAAAGTTCTCCGGGAGCTGAACTCGTTGATTTCAGGCTCTCCGACCACCGCAAACGACGTGTTGGACGAAGATGTGACCGATTCTGAGTGGTTCTTCTTGCTTTCAATGGCTCAATCGTTTGTCACCGGAGTTGGTTTACCCGGCCAGGCGTTTTTCAATATGACCACCTTTTGGGTTTCCGGAACCGACCGGCTGATTCTTTCGCCGTTCGATCGCGCTCGCCAGGGTCAGAGTTTTGGTCTGCAGACAATGGTTTGTGTACCGCTGGTGAACGGAGTCATTGAACTGGGTTCGACAGAGCTGATTCATCAGAGCTCCGATTTGGCGAATTCGATTAGCGTGCTGTTCGATTTCAGTAACGTCGAAGTCGGTTCTTGGCCGACGATGGAAGCTGGCAATGAAGACGAAACCGATCCGTCGGCGTTCTGGATCACTGACACGCTTACCGCCATGGACATGAATGCTCCGACGAAGCCAGTTGATTTCGAAAACCCTGCCTCGAGCACTTTAACGGGAAATCCAGAACCCGATCAACAGATGAAGTTGGAAACCGTGGAGATTGGGGATTTGGAAGAGAGTAAGAGGAGCTACACGCAGATCGTACCGGAGAAGAAAATCGAAAAGAATAAGAAATCTCCCATATCGTGCTGTTATAACGACGACGGGATGCTTTCGTTCACATCCAGCGTGATACTGCCATCTTCCAACGGAATGAAATCGGTGAATTCGAATCATTCCGATCCAGAACCTTCGGCCATTCGGGAAGTGGAGAGTTGCAGAGAAACAGAAGAGGAAAAACGCCCCCGGAAAAGAGGTCGGAAGCCGGCGAATGGAAGAGAAGAGCCTTTAAACCATGTGGAAGCGGAAAGACAACGCCGGGAAAAGCTGAATCAGAAATTCTACGCGCTACGCGCCGTCGTCCCAAACGTTTCAAAAATCGACAAAGCCTCCATCCTAAGCGACGCTGTTTCGTACATAAAAGACCTCGAAAAAAGGATTCATATGGCTGATTCAGAAAAAGAACAACTCGAACAGAAACTAAATCTCGCGAAGAAGAAAACCCATTTCAATCCAAACCAATCGTCTTCTCCTTCAGACGAGAACTCTGTCGAATCGTCTGAAATAGAGGTAGAGGTGAAGCTGATTGGTTCGGACGCCATGATCAGAATACAGTGCAGCAAGAAGAACCATCCAGCTGCGACATTAATGGAAGCTCTGAAAGCTCTGGATCTGGATATGCACCATGCCAGTGTTTCTGTGGTGAATGAGTTCATGATTCTTCAAGCAACAGTGAAAATGGGTAATAGATTATACTCTCAGGATCAGCTCAAAAGTGAACTTTTATCCAAAATAAGCAATACCGCGAAGGAAGGGGAGCAGCATTAG 1761 48.44 MHHGMTDYRLPASTMSNLWTDETSTMNSFISSDFLTCDPFKTVSLSQPSPTGRTFGQETLQHRLQALIEGAHENWTYAIFWQCSYDFSGTLVLGWGDGYYKGEYRKRKGKVKMTMTSPAEQEHRKKVLRELNSLISGSPTTANDVLDEDVTDSEWFFLLSMAQSFVTGVGLPGQAFFNMTTFWVSGTDRLILSPFDRARQGQSFGLQTMVCVPLVNGVIELGSTELIHQSSDLANSISVLFDFSNVEVGSWPTMEAGNEDETDPSAFWITDTLTAMDMNAPTKPVDFENPASSTLTGNPEPDQQMKLETVEIGDLEESKRSYTQIVPEKKIEKNKKSPISCCYNDDGMLSFTSSVILPSSNGMKSVNSNHSDPEPSAIREVESCRETEEEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKIDKASILSDAVSYIKDLEKRIHMADSEKEQLEQKLNLAKKKTHFNPNQSSSPSDENSVESSEIEVEVKLIGSDAMIRIQCSKKNHPAATLMEALKALDLDMHHASVSVVNEFMILQATVKMGNRLYSQDQLKSELLSKISNTAKEGEQH 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38538853 38540613 + BLOR10723 Blo02g00993 57223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00993 586 MobiDBLite consensus disorder prediction 375 414 - -
Blo02g00993 586 PANTHER TRANSCRIPTION FACTOR MYC2 337 577 - -
Blo02g00993 586 PANTHER TRANSCRIPTION FACTOR MYC2 49 271 - -
Blo02g00993 586 CDD bHLH_AtAIB_like 402 477 - -
Blo02g00993 586 Gene3D - 397 481 IPR036638 GO:0046983
Blo02g00993 586 MobiDBLite consensus disorder prediction 477 495 - -
Blo02g00993 586 SMART finulus 411 460 IPR011598 GO:0046983
Blo02g00993 586 MobiDBLite consensus disorder prediction 360 414 - -
Blo02g00993 586 PANTHER MYC 49 271 IPR045084 GO:0003700|GO:0006355
Blo02g00993 586 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 408 474 IPR036638 GO:0046983
Blo02g00993 586 PANTHER MYC 337 577 IPR045084 GO:0003700|GO:0006355
Blo02g00993 586 MobiDBLite consensus disorder prediction 360 374 - -
Blo02g00993 586 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 60 241 IPR025610 -
Blo02g00993 586 MobiDBLite consensus disorder prediction 476 497 - -
Blo02g00993 586 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 405 454 IPR011598 GO:0046983
Blo02g00993 586 Coils Coil 451 478 - -
Blo02g00993 586 Pfam Helix-loop-helix DNA-binding domain 409 455 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00993 Blo03g00858 CCT
Blo02g00993 Blo19g00189 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00993 Blo-Chr2:38538853 Blo03g00861 Blo-Chr3:34437532 0 dispersed
Blo05g00367 Blo-Chr5:4402259 Blo02g00993 Blo-Chr2:38538853 1.25E-15 dispersed
Blo06g00041 Blo-Chr6:985921 Blo02g00993 Blo-Chr2:38538853 1.62E-18 dispersed
Blo16g00325 Blo-Chr16:8400805 Blo02g00993 Blo-Chr2:38538853 8.76E-20 dispersed
Blo02g00993 Blo-Chr2:38538853 Blo03g00858 Blo-Chr3:34406074 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12053 PF14215 bHLH-MYC_N 2.30E-50 CL0161 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00993 K13422 - vvi:100250607 594.734