Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00240 ATGAACGACGCAGATGTATCTAAGCAGATCCAGCAGATGGTGAGGTTTATCCGCCAGGAAGCGGAGGAAAAAGCGAACGAGATCTCTGTTTCTGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGCTGGTTGAGGCAGAAAAGAAGAAGATCAGACAAGAGTACGAGAAAAAGGAGAAGCAAGTCGAAGTCCGGAAAAAGATTGAGTATTCTATGCAGCTTAATGCTTCTAGAATTAAAGTTCTCCAAGCTCAAGATGATGTTGTCAACTCCATGAAAGAAGCAGCATCAAAGGAACTTCTAAGCGTCTGCCACAACCAGCATGGATACAAAAATCTCTTGAAAGATCTCATAGTTCAGGATTTTAAAGAAATGTTCATGGATAGATTCGGTCATTCAAGGAGAGGAAACTACTGTGATCGCCTTTTCTCACTTCGGCAAGAGGGGATGGTGGAAGAATACAACATAAAATTTGAGTATGTAGTTTTAAGTTTGTTTGGGATTCTTGATGATGTGTTGTTTAGTTCTTTTTTTAATGGGTTGAAAAATGAAATTAAAGGAGAAGCAAAATTAATAAGGCCAGTGGGCATGCTAAATTTAATGGAATCTTCTCAAATAATGTCATTTAGACGTACTAATGCACCGTCCACGTTCCAATCTTTGATTAATAAGATATTTTACCAATTCTTTCAAATTGATGTTTTTCATGACATTTTAGTATATAGTTGTTTGGTTGAAAAACATTTAGAACATTTCAACATAGCTCTACAAATGCTGTCAACACATCAATGCTTAAAAAATATCAGTTTTGTTAGCTTGCTTCGACTGAAAGAGCCAGCTGTATTGCTGCGATGTCGGGAAGAAGACCTTCAATTGGTTGAGGATGTGATACAATCTGCAGCGAAGGAATATGCTCAAAAAGCAAGTGTTCATCCTCCGGAAATTATAGTTGACACTCATGTTTTTCTACCACCTGCTCCAAGCCATTTCAATGCTCATGGTCCATATTGCTCTGGAGGTGTAGTGTTGGCATCCCGAGATGGAAAGATTGTTTGTGAGAACACCCTCGACGCAAGGTTGGATGTCGTGTTTCGTAAAAAACTTCCAGAGTTCCATTACTTCGGGAAGGATGACTGCGAACTGGAACTGCATGTTTTTTCGCCAATTGCCAATTAA 1176 39.12 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEVRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLSVCHNQHGYKNLLKDLIVQDFKEMFMDRFGHSRRGNYCDRLFSLRQEGMVEEYNIKFEYVVLSLFGILDDVLFSSFFNGLKNEIKGEAKLIRPVGMLNLMESSQIMSFRRTNAPSTFQSLINKIFYQFFQIDVFHDILVYSCLVEKHLEHFNIALQMLSTHQCLKNISFVSLLRLKEPAVLLRCREEDLQLVEDVIQSAAKEYAQKASVHPPEIIVDTHVFLPPAPSHFNAHGPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEFHYFGKDDCELELHVFSPIAN 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5210447 5217420 - BLOR11421 Blo03g00240 57704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00240 391 SUPERFAMILY V-type ATPase subunit E-like 263 371 - -
Blo03g00240 391 Gene3D - 1 62 - -
Blo03g00240 391 Coils Coil 38 61 - -
Blo03g00240 391 Pfam ATP synthase (E/31 kDa) subunit 16 125 IPR002842 GO:0033178|GO:0046961|GO:1902600
Blo03g00240 391 Pfam ATP synthase (E/31 kDa) subunit 263 370 IPR002842 GO:0033178|GO:0046961|GO:1902600
Blo03g00240 391 PANTHER BNAC03G72900D PROTEIN 1 120 - -
Blo03g00240 391 PANTHER BNAC03G72900D PROTEIN 262 375 - -
Blo03g00240 391 Gene3D - 249 377 IPR038495 -
Blo03g00240 391 SUPERFAMILY DNA/RNA polymerases 206 265 IPR043502 -
Blo03g00240 391 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 120 IPR002842 GO:0033178|GO:0046961|GO:1902600
Blo03g00240 391 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 262 375 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01135 Blo03g00240 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00240 Blo-Chr3:5210447 Blo05g00647 Blo-Chr5:20941735 1.82E-25 dispersed
Blo02g01135 Blo-Chr2:42740776 Blo03g00240 Blo-Chr3:5210447 2.43E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00240 K02150 - csv:101217221 203.371