Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00378 ATGCAGGAACCAGGCTTGGGAATGATGGCATCCGCCGCCGCCGGCGGTGGCTCTAGCTTGAGCGGCGAAGTATCGATCTCCGGCGACCACCATCACCGGCAAATCAAGGTTGAGATAGCCGCTCATCCCATCTACGAGCAGCTTCTCGCCGCCCACGTGGCTTGTCTTCGTGTAGCTACCCCTATTGATCAGTTGCCGCTCATAGACGCGCAGCTGGCTCAATCGGAACATCTTTTACGCTCTTATGCGGCGCAGTCTCAACATCATCAAGTCCATTCTCTCTCTCCCCATGAGCGCCAAGAGCTTGACAACTGCTTGGTACTAACTTCTTCTTCTTGCAATTTTCATGGCTAA 354 54.24 MQEPGLGMMASAAAGGGSSLSGEVSISGDHHHRQIKVEIAAHPIYEQLLAAHVACLRVATPIDQLPLIDAQLAQSEHLLRSYAAQSQHHQVHSLSPHERQELDNCLVLTSSSCNFHG 117
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8848352 8848705 - BLOR11559 Blo03g00378 57842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00378 117 MobiDBLite consensus disorder prediction 1 27 - -
Blo03g00378 117 SMART KNOX1_2 33 77 IPR005540 GO:0003677|GO:0005634
Blo03g00378 117 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 2 105 - -
Blo03g00378 117 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 105 - -
Blo03g00378 117 Pfam KNOX1 domain 35 76 IPR005540 GO:0003677|GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00378 Blo19g00301 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00378 Blo-Chr3:8848352 Blo12g01065 Blo-Chr12:28422696 5.75E-18 dispersed
Blo19g00301 Blo-Chr19:19356768 Blo03g00378 Blo-Chr3:8848352 3.47E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00378 - - cmos:111459669 144.05