Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00534 ATGTGTAGCTCACGGTGTTTTCTTGTCCTACTTGCTCTGCTTCTGCATTTATCTGTTGCTTTAGTTTCTGCTCAGCGATCTAATGGCACCAGTACCTGGCAGTCTCTCAGCGGAAATGCTCCTTTAGTTATTGCACGTGGTGGATTCTCGGGCCTATTTCCTGATTCTAGTATATTTGCCTACACTTTGGCTGTAGCAATCAGCGTACCTAATGTGGTCTTATGGTGTGATGTGCAATTAACAAAGGATGGGGCTGGAATTTGTCTTCCAAATTTGAAACTAGATAATTCAACTGATATATCGGTCGTTTATAGTACATCAGAAAATCAGTACCTAGTGAATGGGGTTAATACTACGGGATGGTTTTCTATCGATTTCACTCTCGATGACCTTGCAAATGTTTCCGATTGTTTTGCTCATCTGGGAGATGCTGACAAAAAACAAGCAAAACCGTTGGTTATTTCAAAGTTTGGAGCAAGTGGAGACTACCCCGGCTGTACTGACTTGGCCTATTCCAAAGCTATTTCAGTTGGTGTTGAAATACTTGACTGTCCTGTTCAAATAGCTAAGGATGGGACGCCATTTTGCTTAAGTTCTATAAATCTTATAGATAGTACTACTATTGCGCAAACCAGTTATAGCAACCTTTCAAAAACAATTCCAGAGATTATGACTGGTAGTGGAATTTACGCTTTTGATCTTACATGGCCTCAGATTAGCGATTTGACTCGAAATCGATGTTTAAATTTGGGCAATAATACTCCAGTCTACATGACCCCGGTCCAGCCTGGTAGTCTGTATAAACTCATCACCCCTGCCTACTTACCTCCAGCAGCAGCTCCAAGTCCAGTCCTGAAAGTGTCAGATGTGGATGAGCCGCCATTGCCTTCAATCTCTGAAGCGGTAACTCCGGCCCCGTCTTCCCCAACCGGGTTGGGAGCCACCCCACCCTCCCGAAGTGGCCAACCCAGGCTCACGTCCATCTTCTTCATCCATGGCCTTGGACTTGTGCTAGCCGCCCTTGTTTCTCTTTGA 1035 44.64 MCSSRCFLVLLALLLHLSVALVSAQRSNGTSTWQSLSGNAPLVIARGGFSGLFPDSSIFAYTLAVAISVPNVVLWCDVQLTKDGAGICLPNLKLDNSTDISVVYSTSENQYLVNGVNTTGWFSIDFTLDDLANVSDCFAHLGDADKKQAKPLVISKFGASGDYPGCTDLAYSKAISVGVEILDCPVQIAKDGTPFCLSSINLIDSTTIAQTSYSNLSKTIPEIMTGSGIYAFDLTWPQISDLTRNRCLNLGNNTPVYMTPVQPGSLYKLITPAYLPPAAAPSPVLKVSDVDEPPLPSISEAVTPAPSSPTGLGATPPSRSGQPRLTSIFFIHGLGLVLAALVSL 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20369706 20374779 - BLOR11715 Blo03g00534 57998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00534 344 Pfam Glycerophosphoryl diester phosphodiesterase family 158 249 IPR030395 GO:0006629|GO:0008081
Blo03g00534 344 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 243 340 - -
Blo03g00534 344 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 136 243 - -
Blo03g00534 344 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 12 135 - -
Blo03g00534 344 Gene3D Phosphatidylinositol (PI) phosphodiesterase 136 253 IPR017946 GO:0006629|GO:0008081
Blo03g00534 344 Gene3D Phosphatidylinositol (PI) phosphodiesterase 30 135 IPR017946 GO:0006629|GO:0008081
Blo03g00534 344 ProSiteProfiles GP-PDE domain profile. 151 344 IPR030395 GO:0006629|GO:0008081
Blo03g00534 344 MobiDBLite consensus disorder prediction 296 320 - -
Blo03g00534 344 SUPERFAMILY PLC-like phosphodiesterases 150 245 IPR017946 GO:0006629|GO:0008081
Blo03g00534 344 ProSiteProfiles GP-PDE domain profile. 41 150 IPR030395 GO:0006629|GO:0008081
Blo03g00534 344 MobiDBLite consensus disorder prediction 301 320 - -
Blo03g00534 344 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 243 340 - -
Blo03g00534 344 SUPERFAMILY PLC-like phosphodiesterases 39 134 IPR017946 GO:0006629|GO:0008081
Blo03g00534 344 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 136 243 - -
Blo03g00534 344 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 12 135 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00534 Blo10g00857 CCT
Blo03g00534 Blo03g01464 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00534 Blo-Chr3:20369706 Blo03g01464 Blo-Chr3:41264535 5.38E-31 dispersed
Blo03g00534 Blo-Chr3:20369706 Blo03g01463 Blo-Chr3:41256487 5.90E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00534 - - vvi:100246982 176.792