Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00858 ATGACGGATTATGGATTATCGACGACGGCGATGAATCTTTGGACGGACGAGAATGCGTCGGTGATGGACGCCTTCTTGAATTCTGATCTTTCTTCTTTCTGGGCTCAGCCTCCTCTGAACCACCCTTCCTCCGCCTCTACATCTGCTCCTCTCTCCCAATCTCAGCCGTCTGCGGTGGCTTTCTCCCAGGAGAGTCTGCAGCAACGTCTGCAGGCGGTGATCGACGGAGCTCGCGAGAGGTGGACGTACGCGATATTCTGGCAGTCCTCTTACGATTACTCCGGCCCGTCGATTTTAGGGTGGGGTGATGGGTATTACAAAGGGGATGAAGGAAAAGGAGCGACCAGAGCCAATACTCCCACTTCTGCTGCGGAGCAGGAGCACCGGAGAAAAATTCTTCGGGAGCTCAACTCACTGATTTCCGGCTCTGCCGCCGCTTCAGACGACCCCGTCGATGAGGTCGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAATCTTTCGCCAACGGCAGTGGATTGCCCGGTCAGGCTTTGTTCAGTTCCCGACCGGTGTGGGTTTCCGGGCCTGATCGACTAGCGACGTCTACCTGCGAACGGGCTCGGCAGGCTCAGGCCTTCGGGTTGCGGACGATAGTATGTATACCCTCTCCCAACGGAGTGGTTGAATTGGGCTCGACGGAGGTCATTTTGCAGAGCGCCGATCTGACGAATAAAGTAACTGTTTTGTTCAATTTCAATAATCTGGAGGCTGGTTCATGGCCCTTAGACAGTGCTGACCAAGCTCAAACAGACCCATCTTCTCTCTGGCTGAACGATCCATCTGAAATTAAGGAACCGGTTAGCTCAAACCCATCTTCCATGGCTCCAGCTTCAACTACCCAGGAAGCATCAAAGCCAATCCACATCGAAAATCGAAGGTCATTGGAGAATCCGTCCAATCCACAATCGCCTCGGATGCAGACGCAGACGTTCTTCGCCGGAGGATTGAATTTTTCCAGTTACGGATGCAAGCCGGAATCCGGCGATATTCTCAACTTTGGTGAAAGTAAAAGGAGTTCTTGTGATAACGGCAGCTTGTTCTCCGGCCATTCTCAGATCATTCCTGAGGAGCCCGTGAAAAAGAAGAGATCGCCTGGTTCTCGAGGAAGTAACGAAGATGGGATGCTGTCGTTTACTTCCGGCATGATTTTGCCATCTTCAGGCGCGAAATCAAGTGGATGCGGAGTTGATTCAGATCACTCCGATCTCGAAGCTTCAGTGGTTCGCAAGGCAGATAGTAGCAGAGTAGTAGAACCAGAGAAGAAGCCTCGAAAAAGAGGAAGAAAACCAGCAAACGGAAGAGAAGAACCATTAAATCACGTCGAAGCAGAACGACAGAGAAGAGAGAAGCTAAACCAGAGGTTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCTTCCCTTCTCGGCGACGCCATTTCTTACATCAACGAGCTCAAATCCAAGCTTCAAACTTCAGAATCAGAAAACGAAGAATTGCAGGTACAGTTAGATTCAGCGAAAAAGGATTTGGCCAACAAAGAAAATCGCTATACAAGATCGAAACAAGACCAAGAACAGAAGATATCAAATCAAAATGGAGGTAAACTTTCTGAGATGGACATTGATGTAAAAATACTGGGTTGGGACGCCATGATCCGAATTCAATGCAGTAAGAAAAACCATCCAGCTGCTACGTTAATGGCGGCTCTAAAGGAATTACACTTGGAAGTTCACCATGCGAGCATGTCAGTGATGAATAACTTGATGATCCAACAAGCGACAGTGAAGATGGGGAGTAGATTTTACACTCAAGAACAGCTCAAAAATGCTCTGTCGTCAAAATTAAGCGATACCCGATGA 1905 49.19 MTDYGLSTTAMNLWTDENASVMDAFLNSDLSSFWAQPPLNHPSSASTSAPLSQSQPSAVAFSQESLQQRLQAVIDGARERWTYAIFWQSSYDYSGPSILGWGDGYYKGDEGKGATRANTPTSAAEQEHRRKILRELNSLISGSAAASDDPVDEVVTDTEWFFLVSMTQSFANGSGLPGQALFSSRPVWVSGPDRLATSTCERARQAQAFGLRTIVCIPSPNGVVELGSTEVILQSADLTNKVTVLFNFNNLEAGSWPLDSADQAQTDPSSLWLNDPSEIKEPVSSNPSSMAPASTTQEASKPIHIENRRSLENPSNPQSPRMQTQTFFAGGLNFSSYGCKPESGDILNFGESKRSSCDNGSLFSGHSQIIPEEPVKKKRSPGSRGSNEDGMLSFTSGMILPSSGAKSSGCGVDSDHSDLEASVVRKADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQTSESENEELQVQLDSAKKDLANKENRYTRSKQDQEQKISNQNGGKLSEMDIDVKILGWDAMIRIQCSKKNHPAATLMAALKELHLEVHHASMSVMNNLMIQQATVKMGSRFYTQEQLKNALSSKLSDTR 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34406074 34407978 + BLOR12039 Blo03g00858 58322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00858 634 SMART finulus 457 506 IPR011598 GO:0046983
Blo03g00858 634 MobiDBLite consensus disorder prediction 259 301 - -
Blo03g00858 634 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 454 519 IPR036638 GO:0046983
Blo03g00858 634 MobiDBLite consensus disorder prediction 418 461 - -
Blo03g00858 634 Coils Coil 497 542 - -
Blo03g00858 634 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 451 500 IPR011598 GO:0046983
Blo03g00858 634 MobiDBLite consensus disorder prediction 386 410 - -
Blo03g00858 634 MobiDBLite consensus disorder prediction 354 461 - -
Blo03g00858 634 CDD bHLH_AtAIB_like 448 523 - -
Blo03g00858 634 Pfam Helix-loop-helix DNA-binding domain 455 500 IPR011598 GO:0046983
Blo03g00858 634 MobiDBLite consensus disorder prediction 529 548 - -
Blo03g00858 634 MobiDBLite consensus disorder prediction 259 302 - -
Blo03g00858 634 PANTHER TRANSCRIPTION FACTOR MYC2 43 631 - -
Blo03g00858 634 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 66 246 IPR025610 -
Blo03g00858 634 Gene3D - 443 533 IPR036638 GO:0046983
Blo03g00858 634 PANTHER MYC 43 631 IPR045084 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00993 Blo03g00858 CCT
Blo03g00858 Blo19g00189 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00858 Blo-Chr3:34406074 Blo16g00474 Blo-Chr16:18744818 1.28E-83 dispersed
Blo14g00682 Blo-Chr14:15294811 Blo03g00858 Blo-Chr3:34406074 1.98E-18 dispersed
Blo03g00858 Blo-Chr3:34406074 Blo03g00861 Blo-Chr3:34437532 0 proximal
Blo02g00993 Blo-Chr2:38538853 Blo03g00858 Blo-Chr3:34406074 0 transposed
Blo19g00189 Blo-Chr19:8412187 Blo03g00858 Blo-Chr3:34406074 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12132 PF14215 bHLH-MYC_N 1.70E-53 CL0161 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00858 K13422 - vvi:100250607 812.372