Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00899 ATGGAATGCGTAGAGTTGGCTTTGAAATCTAGTTTTAGAAAGAAGATGTTCATGAATTTGAGCCCTCAACTACGTTTTAATGAATCAGGGTCGTTAAGTGCTGAAAATGTCGATTCATGTGATGACTTTTCTGTAGACGAACTCCTTAATTTCTCTTACGAAGATGAATATGAAGAGCCAGAGGATGGAGAAGAAGAAAAACGAGAAGAAAACGAACACGACAAGGGCTTTGCCTCTGTCTCTGTTTTGTCTCAAGAACTGCTGGAAAACTGCGAAAACCCGAATGAAAGCTCGAGTTTGTGTGTTGAAGACGGATTCGTCTCTTTACCCACGAGCGAACTCAGTGTTCCGGCCGATGATTTGGCGGACCTTGAATGGTTGTCCCATTTCGTCGAGGATTCTTTCTCCGCCTACTCTGCGCCATTTCCGGCAGGAATTTGGGCCGGTAAGTCGAATCAGAGAGAAACAATAAAGGAACCCGAGGCTTTTATTTCCCCGAAACTCGAAACTCAGTTTCCGGCGAAGGCGAGAAGCAAGCGGGCAAGAGCCGGAGGTAGGTTTTGGGTTCTAGGATCCCCTACGTTAACGGAATCTTCGTCAAGCTCAACTACGTCTTCGTCGTCGACTTCATCACCGTCAAGCCCCTTGCTTTTATACAACACCGCGGTTCCTCTCCTCGACAAGACAGTTTTCCCGTTCGAAAAGCCACTTGCGAAGAAACCGAAGAACAGACCCCCAGTCAACGGAAATGGCGGAAGTGGGACCCAGACAAGTCGCAGGTGCAGCCATTGCGGCGTTCAGAAAACGCCACAGTGGAGGGCCGGCCCTCTCGGGGCGAAGACACTCTGCAACGCGTGTGGTGTTCGATACAAGTCGGGTCGACTCCTACCCGAATACAGACCTGCTTGTAGCCCCACTTTCTCCAGCGAATTGCACTCAAACCATCACCGGAAAGTGCTGGAAATGCGCCGAAATAAGGATACTCCGTCACAACTGGAGAGGGAAACAGAAAACTGA 1017 49.26 MECVELALKSSFRKKMFMNLSPQLRFNESGSLSAENVDSCDDFSVDELLNFSYEDEYEEPEDGEEEKREENEHDKGFASVSVLSQELLENCENPNESSSLCVEDGFVSLPTSELSVPADDLADLEWLSHFVEDSFSAYSAPFPAGIWAGKSNQRETIKEPEAFISPKLETQFPAKARSKRARAGGRFWVLGSPTLTESSSSSTTSSSSTSSPSSPLLLYNTAVPLLDKTVFPFEKPLAKKPKNRPPVNGNGGSGTQTSRRCSHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRNKDTPSQLERETEN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10469409 10470515 - BLOR13811 Blo04g00899 59927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00899 338 MobiDBLite consensus disorder prediction 311 338 - -
Blo04g00899 338 MobiDBLite consensus disorder prediction 236 261 - -
Blo04g00899 338 Pfam GATA zinc finger 261 295 IPR000679 GO:0006355|GO:0043565
Blo04g00899 338 PANTHER GATA TRANSCRIPTION FACTOR 1 328 - -
Blo04g00899 338 MobiDBLite consensus disorder prediction 54 76 - -
Blo04g00899 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 256 317 - -
Blo04g00899 338 SMART GATA_3 255 309 IPR000679 GO:0006355|GO:0043565
Blo04g00899 338 MobiDBLite consensus disorder prediction 310 338 - -
Blo04g00899 338 ProSiteProfiles GATA-type zinc finger domain profile. 255 291 IPR000679 GO:0006355|GO:0043565
Blo04g00899 338 MobiDBLite consensus disorder prediction 195 214 - -
Blo04g00899 338 PANTHER GATA TRANSCRIPTION FACTOR 1 328 - -
Blo04g00899 338 Gene3D - 253 335 IPR013088 GO:0006355|GO:0008270
Blo04g00899 338 PIRSF Txn_fac_GATA_plant 1 338 IPR016679 GO:0003677|GO:0005634|GO:0045893
Blo04g00899 338 ProSitePatterns GATA-type zinc finger domain. 261 286 IPR000679 GO:0006355|GO:0043565
Blo04g00899 338 CDD ZnF_GATA 260 308 IPR000679 GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00899 Blo16g00063 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00646 Blo-Chr2:15245325 Blo04g00899 Blo-Chr4:10469409 1.61E-61 dispersed
Blo04g00899 Blo-Chr4:10469409 Blo06g00706 Blo-Chr6:30149587 8.18E-47 dispersed
Blo16g00063 Blo-Chr16:1975158 Blo04g00899 Blo-Chr4:10469409 1.46E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12317 PF00320 GATA 2.00E-16 CL0167 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00899 - - zju:107410110 333.569