Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00709 ATGGCTTCCATTGAATTTCCTTTCATCCTCCTCTCTATTATCTCATCTTTATTTTCAGGTGTTCAATCGGCCACATTCGCCGTTGTTAACAATTGCAGCTACACAGTATGGCCCGGAATCTTGTCAAGTGCCGGAACCCCGGAGCTCTCCACCACCGGCTTCGTCCTCTTATCCGGTGGCTCCACCCTCGTCAACGTCCCAACGTCCTGGTCTGGTCGCCTATGGGGTCGTACATATTGCTCTCAAGATTCCGGTGGGACATTCTCCTGCGCCACCGCAGACTGCGGCTCCGGCGCTGTCGAATGTGGTGGAGCAGGTGCAGTGCCACCAGCTACCCTCGCCGAGTTTACCTTGAACGGCAGCGGCGGCCTCGATTTTTACGACGTCAGCCTCGTGGACGGCTATAACCTGGGAATTCTCATCACCCCACTAGGCGAAACCACTGGAAATTGTACTTCGACTGGGTGCTTTGCCGATTTAAACATGGTTTGCCCGCCTGAGCTGCGAGTGACGATGACGGGCCGAGACGGCAGTGAGCAGAACGTGGCCTGCAAGAGCGCGTGCGAGGCGTTCGGAGAGCCGGAATATTGTTGTAGCGGAGATTATTCAAATCCAAATACTTGCAAACCTACGTCATATTCTCAGTTCTTCAAAAAAGAATGTCCATTAGCTTACAGCTATGCCTACGACGATGGAAGCAGCACCTTCACGTGCTCTTCCCCTTCCTACATCATCACTTTCTGCCCCTCCTCCTCCCCCAGTTTGAAATCATCGAACGGACAATATCCAGTGGCTGTTGACTTCTCCGGCAGGAGTTTTGCAGAGTGCGATTCAAAGGAAAAGGTGTACATAACACTTATTTTTCTTCATGGGTGGGCAAACCAGTTCTCTGTTCCAGTTCCGGACATCTTGGAACCGACCATTCGGTTCTCGGTTCCAAGCGTGAGGAATCGGAATCAGAACCGCAAGGAACGGGTCCCAAAACCAAACCCGAATCTCTGTTCCAATTCGGTTCCAGTTCTAAACGGTTCCGAAAACTAA 1041 51.87 MASIEFPFILLSIISSLFSGVQSATFAVVNNCSYTVWPGILSSAGTPELSTTGFVLLSGGSTLVNVPTSWSGRLWGRTYCSQDSGGTFSCATADCGSGAVECGGAGAVPPATLAEFTLNGSGGLDFYDVSLVDGYNLGILITPLGETTGNCTSTGCFADLNMVCPPELRVTMTGRDGSEQNVACKSACEAFGEPEYCCSGDYSNPNTCKPTSYSQFFKKECPLAYSYAYDDGSSTFTCSSPSYIITFCPSSSPSLKSSNGQYPVAVDFSGRSFAECDSKEKVYITLIFLHGWANQFSVPVPDILEPTIRFSVPSVRNRNQNRKERVPKPNPNLCSNSVPVLNGSEN 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24415784 24417766 - BLOR15671 Blo05g00709 61143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00709 346 Gene3D Thaumatin 24 249 IPR037176 -
Blo05g00709 346 CDD TLP-PA 25 248 - -
Blo05g00709 346 SMART tha2 26 249 IPR001938 -
Blo05g00709 346 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Blo05g00709 346 MobiDBLite consensus disorder prediction 330 346 - -
Blo05g00709 346 ProSiteProfiles Thaumatin family profile. 23 249 IPR001938 -
Blo05g00709 346 MobiDBLite consensus disorder prediction 315 346 - -
Blo05g00709 346 SUPERFAMILY Osmotin, thaumatin-like protein 24 250 IPR037176 -
Blo05g00709 346 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Blo05g00709 346 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Blo05g00709 346 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Blo05g00709 346 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Blo05g00709 346 PANTHER - 19 269 - -
Blo05g00709 346 PANTHER OS03G0233200 PROTEIN 19 269 IPR001938 -
Blo05g00709 346 Pfam Thaumatin family 30 249 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00882 Blo05g00709 CCT
Blo05g00709 Blo16g00082 CCT
Blo04g00882 Blo05g00709 ECH
Blo05g00709 Blo16g00082 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00473 Blo-Chr3:15956271 Blo05g00709 Blo-Chr5:24415784 8.43E-85 dispersed
Blo05g00709 Blo-Chr5:24415784 Blo12g00882 Blo-Chr12:27019113 6.18E-111 dispersed
Blo05g00709 Blo-Chr5:24415784 Blo01g01603 Blo-Chr1:55891279 1.82E-113 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00709 - - cmo:103490689 372.089