Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo06g00124 | ATGACGGGAGGAGGTTCGTCAGGGAGGATGCCTACTTGGAGAGAGAGGGAAAATAACAAGAGGAGAGAAAGAAAAAGGAGAGCCATTGCTGCTAAGATTTATACTGGTTTAAGAGCTCAGGGAAACTATAAGCTTCCTAAGCACTGTGATAATAACGAGGTCTTGAAAGCTCTGTGTGCTGAAGCTGGTTGGGTCGTCGAAGAAGATGGAACTATCTACAGAAAGGGATGCAGGCCTCCAATGGAGAAAATTGCAGCAAATTTGGCAAACAGGAATGCTTGTTCATCTCTTCAACCAAGTCCTCAATCTTCCTCCTTCCCTAGCCCTGCACCATCCTACCCTGCAAGTCCTTCCTCATCTTCATTTCCTAGCCCAACCCCATTCGATCAAAATCCTTCCACTTATCTCCTTCCATTTCTTCAAAACATAGCTTCAATTCCTACAAATCTCCCTCCTCTGAGAATATCAAACAGCGCCCCTGTAACTCCACCTCTTTCATCTCCAACCTCAAGAGGCTCCAAGCGGAAACCCGATTGGGAGTCCCTCTCTAATGGATCATTATCCTCTTTTCGCCACCCCCTTTTTGCCGTCTCTGCTCCGGCCAGCCCCACAAGGCAGCATCACCTTCCTCCGGCAACAATTCTGGAGTGTGACGAGTCAGATGCATCCACAGTTGACTCCGGCAGGTGGGTTAGTTTTCAGACCACTGGACCTGCCGCTATTCCTACTTCGCCTACGTTCAATTTGATGAAGCCATTGATACAACAGTGTTCTTTACAAGACGCTGTTCAGGGACGAGGGCCAATGTTTTTGGATTTTGAATTCGAAAGTGGCAAAGTGAAGCCATGGCAGGGTGAGAGGATTCACGAGGTTGGTGTTGACGATTTAGAGCTTACCCTTGGAGGTGGCAAGACTCTTGGTTGA | 924 | 47.94 | MTGGGSSGRMPTWRERENNKRRERKRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCAEAGWVVEEDGTIYRKGCRPPMEKIAANLANRNACSSLQPSPQSSSFPSPAPSYPASPSSSSFPSPTPFDQNPSTYLLPFLQNIASIPTNLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESLSNGSLSSFRHPLFAVSAPASPTRQHHLPPATILECDESDASTVDSGRWVSFQTTGPAAIPTSPTFNLMKPLIQQCSLQDAVQGRGPMFLDFEFESGKVKPWQGERIHEVGVDDLELTLGGGKTLG | 307 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 4857397 | 4858669 | + | BLOR16707 | Blo06g00124 | 61417 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo06g00124 | 307 | MobiDBLite | consensus disorder prediction | 104 | 121 | - | - | |
| Blo06g00124 | 307 | MobiDBLite | consensus disorder prediction | 94 | 127 | - | - | |
| Blo06g00124 | 307 | MobiDBLite | consensus disorder prediction | 155 | 185 | - | - | |
| Blo06g00124 | 307 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Blo06g00124 | 307 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 6 | 131 | IPR008540 | - | |
| Blo06g00124 | 307 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 305 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
| Blo06g00124 | 307 | MobiDBLite | consensus disorder prediction | 155 | 172 | - | - | |
| Blo06g00124 | 307 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 1 | 1 | 305 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g01552 | Blo-Chr1:55283183 | Blo06g00124 | Blo-Chr6:4857397 | 1.33E-93 | dispersed | |
| Blo06g00124 | Blo-Chr6:4857397 | Blo10g00726 | Blo-Chr10:22920767 | 2.21E-34 | dispersed | |
| Blo06g00124 | Blo-Chr6:4857397 | Blo11g00263 | Blo-Chr11:2124865 | 6.86E-30 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12451 | PF05687 | BES1_N | 3.50E-60 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo06g00124 | K14503 | - | vvi:100249673 | 416.001 |