Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo07g00855 ATGGCTAAGGATACCTCCGGACTGTGCATAAAGCTCAAAATCCCGAAAAGGCTGAAACCACCTGAAAATCTCCGAGAAGAAGAAGAAGAAGATTTGTCGCAGAAATCACAAGCTTTTTCCCGAGTCTGCCATATCTGCAACAAAGGGTTCAGCTCCGGAAAAGCTTTGGGAGGCCATATGAAAATGCACGTTCGGGCCCTGAAAAAGATTACTGACGACCAAGAAACCTGCGAACTCTACAATAATGGTGGTCGGAGTGGCAAACATGTTTGTTTTTCTTGCCAGAAAGTTTTTCCGTCGAAGAAGTCGTTATTTGGACATATGCGGTCTCATCCCGAAAGATCGTGGAGGGGAATTCAGCCACCGGCGGTTGCGAATCGGCACAGTTCGTCGTCGACTCTTTCTGATGTGGATTCTCCAGAGTATAAATTCGATGATCGGATTGATACAGCTGGTACTACAAGAGCTCCTGCGATGGACTTGTCGAGGTCACTTCTGGGTTGGTCAGTCACTGCCAAAAGAGGCCGGAGAAGCATTTCTTCCGCAGCCTCTTCTGATTCCAGCTCCAACCGACGTAAAAACATCTCCGATAAAGAGATTTCAGGCAAAATAGAAGATGAAAACCCAGAGCTTAATATGAGCAGAAGAAAGCTGAGGAAAAAGAAGGGTAAGAAGATGAGATTAGCTGATTTGGATACACAAGAAGCTGTCGCCGGAGAAGCGAAGAAGACGACTCTGAAACAACGTCAGAATAATAACACATACAGATGCAGTACTTGCAGCAAGACATTTTCAACCCACCAAGCCTTGGGCGGCCATAGGTCGAGCCACAACAAAGGGAAGAACGTTTCCGACCTTGAAGCTCAGGCTGAAGCTAAAGTGAGAGAGGAAGACAGCGAAAGAGGAAGAAAGATCCTAGATTTCGATCTCAACAAGCTTCCATCTCTGAACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTATTAAAAATGGCGATTTTTATGGTTTTTTATACGATCATAGTTAA 1029 45.0 MAKDTSGLCIKLKIPKRLKPPENLREEEEEDLSQKSQAFSRVCHICNKGFSSGKALGGHMKMHVRALKKITDDQETCELYNNGGRSGKHVCFSCQKVFPSKKSLFGHMRSHPERSWRGIQPPAVANRHSSSSTLSDVDSPEYKFDDRIDTAGTTRAPAMDLSRSLLGWSVTAKRGRRSISSAASSDSSSNRRKNISDKEISGKIEDENPELNMSRRKLRKKKGKKMRLADLDTQEAVAGEAKKTTLKQRQNNNTYRCSTCSKTFSTHQALGGHRSSHNKGKNVSDLEAQAEAKVREEDSERGRKILDFDLNKLPSLNEEEEEEEEEEGIKNGDFYGFLYDHS 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26938815 26940068 - BLOR18787 Blo07g00855 63379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo07g00855 342 MobiDBLite consensus disorder prediction 176 209 - -
Blo07g00855 342 ProSitePatterns Zinc finger C2H2 type domain signature. 257 277 IPR013087 -
Blo07g00855 342 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Blo07g00855 342 Pfam C2H2-type zinc finger 42 63 - -
Blo07g00855 342 Pfam C2H2-type zinc finger 89 113 - -
Blo07g00855 342 Pfam C2H2-type zinc finger 255 279 - -
Blo07g00855 342 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 111 IPR013087 -
Blo07g00855 342 MobiDBLite consensus disorder prediction 124 138 - -
Blo07g00855 342 Gene3D Classic Zinc Finger 17 115 - -
Blo07g00855 342 MobiDBLite consensus disorder prediction 176 190 - -
Blo07g00855 342 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 5 320 - -
Blo07g00855 342 MobiDBLite consensus disorder prediction 109 139 - -
Blo07g00855 342 SUPERFAMILY beta-beta-alpha zinc fingers 89 277 IPR036236 -
Blo07g00855 342 SMART c2h2final6 89 111 IPR013087 -
Blo07g00855 342 SMART c2h2final6 41 63 IPR013087 -
Blo07g00855 342 SMART c2h2final6 255 277 IPR013087 -
Blo07g00855 342 MobiDBLite consensus disorder prediction 278 301 - -
Blo07g00855 342 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 5 320 IPR044653 GO:0003700
Blo07g00855 342 MobiDBLite consensus disorder prediction 191 209 - -
Blo07g00855 342 Gene3D Classic Zinc Finger 234 312 - -
Blo07g00855 342 ProSiteProfiles Zinc finger C2H2 type domain profile. 255 282 IPR013087 -
Blo07g00855 342 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 63 IPR013087 -
Blo07g00855 342 MobiDBLite consensus disorder prediction 268 301 - -
Blo07g00855 342 MobiDBLite consensus disorder prediction 313 342 - -
Blo07g00855 342 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00855 Blo10g00890 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00855 Blo-Chr7:26938815 Blo04g01361 Blo-Chr4:31652117 6.84E-08 dispersed
Blo10g00890 Blo-Chr10:27877630 Blo07g00855 Blo-Chr7:26938815 2.95E-133 wgd
Blo02g00119 Blo-Chr2:890731 Blo07g00855 Blo-Chr7:26938815 3.53E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12638 PF13912 zf-C2H2_6 4.50E-09 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo07g00855 - - nta:107769794 144.436