Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00857 ATGGACCATTGGATTACTTTTCGATACGTCGATCGCTTGATAATTAATGGTGGTGGAACGTTCGACGGCCAGGGCCAATTGGGTTGGCGATACAACAATTGTAGTGTAGATCCTTATTGTCCTCCTCTTCCTATTGACCATGGAATAAGCATCGGAAGTGTTGGGGGGTCCCCGAACGAACCAACCATTGGTGAATTGCTTGTGAAAAACTGTACATTTTCCGGTACTCAAAATGGAGTGAGGATGAAAACATGGTCGCCCTCTTATCCGGGCTTGATTTACAACGTTACTTTTGATCAACTCATAATGGACAACGTTAGCAATCCCATCGTCATCGATCAGAACTATTGTCCATCAGGCCGATGCGGACCAACGAGGACGACAAAGGTTCAGGTTCAAGACGTTCAATACACGAACATCTCGGGCACATCAGAGACGAAAGTTGCCGTAAACCTACAATGCAGCGACCTATTTCCATGCACGAATGTAGTCTTGTGTGACATAAGCCTTGACTACAATGGGCCAGGAGGACAGGCAACTGCAGCGTGTTCATCAGTGAAGGGTGCTGCCCATGGAGCTGCTCCTTTGGTTGTTGCTCGTGGGGGGTTTTCTGGATTGTTTCCTGATTCCAGTTTACCAGCCTACAAAATGGCTTTACAAGTCAGTGTACGTGATGTAATCTTCTGGTGTGATGTGCAGTTAACAACTGACGGAGTTGGAATTTGTTTGCCTGATCTGAAGCTAGAAAACTCCACTAACATTGCAGTTGTTTACAATGAATCGGCCAAGCTCTATCTTGTTAATGGCGTCCCAAGCAAGGGATGGTTTTCTTTTGATTTCACTCTCGATGATCTAAAAAACAACGTTGCTCTCACTCAAGGTGTTTACACTCGATACTATAACTTTTATATAGACAATGCTATTCTCACCGTACAAGACGTCGCAAAGCTTTCCCCACCGGGATTATGGTTGAATATCCAGCATGATCTATTCTTCTCAGAACACAAGTTGAGTATGAAAAGCTTTGTAGTCTCTACATCCAAAACAATCAACATCTCATTTATATCATCAACAGAGGTGAACTTTCTGAGAAATATCTCTACAAGTTTCAAACTGAGCACCACGAAGCTGATATTTCGGTTTTCAACTCAAGACGAAATTGAGCCAACAACAAACCAAACTTATGGATTGTTGCTGAAAAATCTTACATTCATCAAAACATTTGCCTCTGGAATTCTTGTCCCCAAAACTTACATATGGCCGGTAGATGTTGTCGGTTATTTAGAACCCCATACAACTCTTGTTTTGGATGCTCATAATGAAGGACTGGAAGTTTTTGCGTCTGAGTTCTATAACGACGTTCCCATAAGTTACAATTATAGTTATGATCCCGTCTCTGAATACCTTTCTTACATCGACAATGGAGAGTTCTCTGTTGATGGTGTACTGTCTGATTTCCCATCAACTGCATCTATGGCATTTGATTGTTTTGCTCATCTTGGAGAAGATAGAGGAGACAAAGGCGTATCTGCAACGCAAACTTTTTCTGCAAAACTGAATCCATCTAGGCCTTTGGTTATCTCAAGGTATGGAGCAAGTGGTGATTTTCCTGGTTGTACCGATTTGGCATACAAAAAAGCAATATCGGACGGTGCTGATATTCTTGACTGTCCTCTTCAAATAACAAAAGATGGGACACTTTTTTGCTCAGGGTCTATTGATCTAACTTATAACACAACAATACTTGAATTAGGCCCCAAATATCGAAAACAAACTATCCCAGAGTTAAAGGTCAATCCTGGAATCTATACCTTTGACTTGACATGGCCTGAAATCAAGAGTTTAAGTCCTAAAATGTCAAACCCCTTTTCAGCATATTCAATCTTCAGAAATCCGACGTACAATAGTAGTGGGAAATATATAACTTTAGCTGAATTTTTGGCTTTGACAAAGAAAGCAAACACTATATCTGGAATCTTACTCATGATAGAGAATGTAGCTTACCTTGCCAGGCATTGTTTTGATGTAATTGATAAAGTCATCGAGGCCTTGACCGAAGCTGGTTATGGAGAGAAGACAGCTCAAAATGTCTTGATTCAGTCTTCTAACTCCTCTGTTTTAAGGAAATTCAAGGAGAAAAGCAATTATGAGCTTGTATACACAATTGACGAGAATGTTTGGGACATTCCATCGTCGACTATTGCATACATCAAGAGTTTTGCAAGTGCTGTGGTCATAAACAAGTTTTCTGTCTTTCCTGATAGATATATGTTCCTTGTTGAATCAACCAAAGTTGTATCGAATCTAAAATCATCTCGGCTTTCGGTTTATGTACAACTCTTCAATAACGAGTTCATCTCTCAAGCTTATGATTTCTACTCGGATGCAATGATGGAGATCAACACATTCTCCAAAACAACCAAAGTTGATGGAATTATCACAGCATTTCCATTGACAGCTGCTAGATATAAACAAAATAGGTGTTTAAATTTGGCAAACAACACACCACCGTACATGAAGCCTGCTATGCCTGGCTCACTCCTGCAATTAACTCAATATTTTTACTCGGCTCAGTCGCCTGCTCCTCCTCCTTATCTCACTCTATCGGAAGTGTTGGAGCCACCATTGCCTGCCGTTTCTAAACCTCTACCTCCAAACGGACAGGCTCAAACTCTACCATGCCATTTCTGCTACAATCTGCCTTTGCTCGTTGCTGCTCTTTTTCTACTTCCACAAGTACTATTCTGA 2748 41.08 MDHWITFRYVDRLIINGGGTFDGQGQLGWRYNNCSVDPYCPPLPIDHGISIGSVGGSPNEPTIGELLVKNCTFSGTQNGVRMKTWSPSYPGLIYNVTFDQLIMDNVSNPIVIDQNYCPSGRCGPTRTTKVQVQDVQYTNISGTSETKVAVNLQCSDLFPCTNVVLCDISLDYNGPGGQATAACSSVKGAAHGAAPLVVARGGFSGLFPDSSLPAYKMALQVSVRDVIFWCDVQLTTDGVGICLPDLKLENSTNIAVVYNESAKLYLVNGVPSKGWFSFDFTLDDLKNNVALTQGVYTRYYNFYIDNAILTVQDVAKLSPPGLWLNIQHDLFFSEHKLSMKSFVVSTSKTINISFISSTEVNFLRNISTSFKLSTTKLIFRFSTQDEIEPTTNQTYGLLLKNLTFIKTFASGILVPKTYIWPVDVVGYLEPHTTLVLDAHNEGLEVFASEFYNDVPISYNYSYDPVSEYLSYIDNGEFSVDGVLSDFPSTASMAFDCFAHLGEDRGDKGVSATQTFSAKLNPSRPLVISRYGASGDFPGCTDLAYKKAISDGADILDCPLQITKDGTLFCSGSIDLTYNTTILELGPKYRKQTIPELKVNPGIYTFDLTWPEIKSLSPKMSNPFSAYSIFRNPTYNSSGKYITLAEFLALTKKANTISGILLMIENVAYLARHCFDVIDKVIEALTEAGYGEKTAQNVLIQSSNSSVLRKFKEKSNYELVYTIDENVWDIPSSTIAYIKSFASAVVINKFSVFPDRYMFLVESTKVVSNLKSSRLSVYVQLFNNEFISQAYDFYSDAMMEINTFSKTTKVDGIITAFPLTAARYKQNRCLNLANNTPPYMKPAMPGSLLQLTQYFYSAQSPAPPPYLTLSEVLEPPLPAVSKPLPPNGQAQTLPCHFCYNLPLLVAALFLLPQVLF 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27100804 27109624 + BLOR02647 Blo10g00857 66053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00857 915 Gene3D - 37 196 IPR012334 -
Blo10g00857 915 SUPERFAMILY Pectin lyase-like 3 196 IPR011050 -
Blo10g00857 915 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 190 891 - -
Blo10g00857 915 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 190 891 - -
Blo10g00857 915 SUPERFAMILY PLC-like phosphodiesterases 195 490 IPR017946 GO:0006629|GO:0008081
Blo10g00857 915 Pfam Glycerophosphoryl diester phosphodiesterase family 531 818 IPR030395 GO:0006629|GO:0008081
Blo10g00857 915 Pfam Glycerophosphoryl diester phosphodiesterase family 202 488 IPR030395 GO:0006629|GO:0008081
Blo10g00857 915 CDD GDPD_SHV3_repeat_1 195 493 - -
Blo10g00857 915 SUPERFAMILY PLC-like phosphodiesterases 523 823 IPR017946 GO:0006629|GO:0008081
Blo10g00857 915 Gene3D Phosphatidylinositol (PI) phosphodiesterase 197 493 IPR017946 GO:0006629|GO:0008081
Blo10g00857 915 Gene3D Phosphatidylinositol (PI) phosphodiesterase 522 824 IPR017946 GO:0006629|GO:0008081
Blo10g00857 915 ProSiteProfiles GP-PDE domain profile. 195 494 IPR030395 GO:0006629|GO:0008081
Blo10g00857 915 Pfam Glycosyl hydrolases family 28 47 187 IPR000743 GO:0004650|GO:0005975
Blo10g00857 915 ProSiteProfiles GP-PDE domain profile. 524 824 IPR030395 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01464 Blo10g00857 CCT
Blo03g00534 Blo10g00857 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01463 Blo-Chr3:41256487 Blo10g00857 Blo-Chr10:27100804 9.70E-11 dispersed
Blo08g00528 Blo-Chr8:15085651 Blo10g00857 Blo-Chr10:27100804 0 dispersed
Blo10g00855 Blo-Chr10:27079185 Blo10g00857 Blo-Chr10:27100804 4.95E-10 dispersed
Blo10g00857 Blo-Chr10:27100804 Blo04g00548 Blo-Chr4:4739744 1.99E-09 dispersed
Blo16g00164 Blo-Chr16:3775839 Blo10g00857 Blo-Chr10:27100804 1.21E-08 dispersed
Blo10g00856 Blo-Chr10:27091425 Blo10g00857 Blo-Chr10:27100804 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00857 - - jre:108984850 815.453