Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo11g00894 ATGGATCCGCAATCAGTGAACCAGAGGCATTTTCAGAGATCGAATTCTAATTCGGCGTGTTACAATCTATCGGAGATCTGGAACCTTCCTATCAACGGCGCTATTGAAAAATCTGGAGGAGGATTAAACTTAAGAACTCCTTGTTTTGGGAAGAACACGAGCCAGATTGGGGACGTTTCGACTGCAGAATCGGCGAGCTTCGAGCAATTACCTGTCAATGGCGGTTGCAGAAAGCGAGGAGGCGGAGAGGACGAGTCTTCCAAATTCCCGGTAAGCATTAGTCTACTTAAATACAGCACGAATTTTAGCTTAATCACATCTTGGTTGCTAAATGAACTTTCTAGCTGCAGTAATGGAAAACGGGATAAGAAAGCAGGATCGAAGGATGAGGGAGATGAAAGAGGGAAGAAAGATTACATCCACGTTCGAGCGAGAAGGGGGCAAGCTACTGATAGTCACAGTTTAGCCGAGAGAGCTAGACGTGAAAAGATAAGCGAGAGAATGAAGATTCTCCAAGACATAGTCCCAGGGTGTAATAAGGTTATTGGGAAAGCAATTGTTCTCGACGAGATAATCAATTACATTCAGTCTCTACAACGTCAGGTTGAGTTTTTATCTATGAAGCTTGAAGCAGTGAATTCAAAACTCATGTCGGACAACGCAATGACAGAGTTTCCTTGTAAAGATCTTGGGTACAGGGCTACTCTCTCCACATATCCTTCACAAATAAACCCAGAATACGACTGTGGATCTGCGTCGCATGAGTGGCTCACCCGCGGCTTCGAAAGAAGTAATAGACTAAACTCTGCAACTTTCTCCTCCACCACCAATAAAACAATGTACAAGTAA 849 43.93 MDPQSVNQRHFQRSNSNSACYNLSEIWNLPINGAIEKSGGGLNLRTPCFGKNTSQIGDVSTAESASFEQLPVNGGCRKRGGGEDESSKFPVSISLLKYSTNFSLITSWLLNELSSCSNGKRDKKAGSKDEGDERGKKDYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKAIVLDEIINYIQSLQRQVEFLSMKLEAVNSKLMSDNAMTEFPCKDLGYRATLSTYPSQINPEYDCGSASHEWLTRGFERSNRLNSATFSSTTNKTMYK 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17912638 17914158 + BLOR03770 Blo11g00894 67094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo11g00894 282 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 263 IPR024097 GO:0006355
Blo11g00894 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 215 IPR036638 GO:0046983
Blo11g00894 282 Coils Coil 282 282 - -
Blo11g00894 282 Gene3D - 145 224 IPR036638 GO:0046983
Blo11g00894 282 PANTHER BNAC05G07950D PROTEIN 1 263 - -
Blo11g00894 282 SMART finulus 154 204 IPR011598 GO:0046983
Blo11g00894 282 Coils Coil 195 215 - -
Blo11g00894 282 MobiDBLite consensus disorder prediction 118 138 - -
Blo11g00894 282 Pfam Helix-loop-helix DNA-binding domain 152 199 IPR011598 GO:0046983
Blo11g00894 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 198 IPR011598 GO:0046983
Blo11g00894 282 CDD bHLH_AtBPE_like 138 216 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00412 Blo11g00894 CCT
Blo01g00412 Blo11g00894 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00894 Blo-Chr11:17912638 Blo13g00032 Blo-Chr13:522851 9.70E-61 dispersed
Blo11g00894 Blo-Chr11:17912638 Blo01g00412 Blo-Chr1:4665092 2.13E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12957 PF00010 HLH 2.80E-08 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo11g00894 - - vvi:100256975 213.386