Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo11g00905 | ATGATCACCCATCTTCCGCTTTGCTCAATTGCAAACCCAAAAAAGTTTTGTGTTGAAATAATTGAGATTGTTTTTATTTGTTTTTTGATGAATTCTATGTTTATCTTACGCCGCTCGTCCATTGAACAAATTGATATATGTGAAATTGACAAGATGGTCATTGACGTCTCCAAACAGTATTTCCCGGATGTAGCTATTAGGTACGAAGATCCTCGAGTGAAACTTTTCATTGGCGATGGAGTTACATTTTTGAAGGTTGCTCCTAAAGGGACTTACGATGCAATCATAGTCGATTCTTTTGATCCAATAGAGCTTTTTGAGGAGCCATTTTACGAGTTGGTGGCAAAGGCTCTTCGTCCAAGGGGTGTTGTGTGTACTCAGGTAGAAAGTATATGGCTTCATATGCACATTATTGAAGACATCATAGTAAATTGCCGCCAAATATTCAAAGGCTCGGTTAATTATGCATGGACTACAATTCCCACTTATCCAAGGTATACTCAGTAG | 507 | 38.26 | MITHLPLCSIANPKKFCVEIIEIVFICFLMNSMFILRRSSIEQIDICEIDKMVIDVSKQYFPDVAIRYEDPRVKLFIGDGVTFLKVAPKGTYDAIIVDSFDPIELFEEPFYELVAKALRPRGVVCTQVESIWLHMHIIEDIIVNCRQIFKGSVNYAWTTIPTYPRYTQ | 168 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 18562131 | 18564842 | - | BLOR03781 | Blo11g00905 | 67105 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo11g00905 | 168 | CDD | AdoMet_MTases | 36 | 129 | - | - | |
| Blo11g00905 | 168 | PANTHER | SPERMIDINE/SPERMINE SYNTHASE-RELATED | 1 | 165 | - | - | |
| Blo11g00905 | 168 | Gene3D | Vaccinia Virus protein VP39 | 1 | 168 | IPR029063 | - | |
| Blo11g00905 | 168 | Pfam | Spermine/spermidine synthase domain | 1 | 165 | - | - | |
| Blo11g00905 | 168 | ProSiteProfiles | Polyamine biosynthesis (PABS) domain profile. | 1 | 168 | IPR030374 | - | |
| Blo11g00905 | 168 | PANTHER | SPERMIDINE/SPERMINE SYNTHASE | 1 | 165 | IPR001045 | GO:0003824 | |
| Blo11g00905 | 168 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 32 | 164 | IPR029063 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo01g00399 | Blo11g00905 | CCT | |
| Blo01g00399 | Blo11g00905 | ECH | |
| Blo06g00871 | Blo11g00905 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo11g00905 | Blo-Chr11:18562131 | Blo01g00399 | Blo-Chr1:4520270 | 7.22E-72 | dispersed | |
| Blo11g00905 | Blo-Chr11:18562131 | Blo06g00871 | Blo-Chr6:32025650 | 1.45E-83 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo11g00905 | K00797 | - | jre:108987113 | 241.506 |