Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00970 ATGGCTCCGTATCATTCCAACTCTGCATTTCCTGTTGAATCATTGTATTGCTCAGAAGAGCATTGGGAGGAGGAATACGAAACAACGGAGGTCAATTTTGAGGAGAATGAAGTTGGGAGAAGCCATTACTGTGATCTAAATAGTACACAGAAACCGAAAATCTTGTTGGAGCAAGATCTATTCTGGGAAGAAGACGAGTTGATCTCTCTACTGTCGAAAGAACACCCGAATAGACTCCATAAAAACCTACTCGCCGACCCATGTCTCGCCGGAGCCAGAAGAAACGCCGTCGAATGGATGCTCAGAGTCACAACCCACCATTGTTTTTCTGCACTCACCGCCGTTCTCTCCGTTGATTATCTCGACAGGTTTCTCTGCAGCTTTCACTTTCAGAAAGAGAACCCATGGATGATCCAGCTTGCTGCAGTGGCTTGTATCTCTTTAGCTGCGAAAGTAGAGGAGACTCACGTTCCGCTTTTTCTGGATCTGCAGGTGGACGAGAGTAGCTACTTATTTGAAGCTAAAATGATTAAGAAAATGGAGATTCTGGTTCTCTCATCTCTACAATGGAGAATGAATCCTGTTACTGCACTTTCCTTTCTAGATTTCATAACACGAAAGCTTGGATTAAGGGATCATCTCTGTTTCGAATTTCTCGGGCGGGCCGAGCAAGTACTTCTCTCTCTAATTACAGATTCTAGGTTCATGTCTTTTCTTCCTTCTGTTCTAGCCAACGCCATTGTACTCCATCTTGTAAATAACATAGAGCCAAGTCTTGCTATTGAATACCAAAATCAGCTGTTTGGTATTCTTCATGTTGACAAGGACAGGGTAGAGGACTGCTACAGACTTATTTCGGAAGAAACAGGCAGCCATGGCAACCGTAGCCACAAGCGCAAGTTTGGTTCTTTACCCTGTAGCCCAAGTGGTGTTTTAGAGCTCCATTTAAGCTCGGATAGTTCGAATGACTCTTGGCCAGCGACATCCTCGCCAGGACCATTGTCGAAGAAAACGAAGGTTATTCATGAACAGCTAATGGAGACACTGAAAACCCATAAAAGTGCTGCAGATTTACTAGGCATTCCTCGCTAA 1092 44.32 MAPYHSNSAFPVESLYCSEEHWEEEYETTEVNFEENEVGRSHYCDLNSTQKPKILLEQDLFWEEDELISLLSKEHPNRLHKNLLADPCLAGARRNAVEWMLRVTTHHCFSALTAVLSVDYLDRFLCSFHFQKENPWMIQLAAVACISLAAKVEETHVPLFLDLQVDESSYLFEAKMIKKMEILVLSSLQWRMNPVTALSFLDFITRKLGLRDHLCFEFLGRAEQVLLSLITDSRFMSFLPSVLANAIVLHLVNNIEPSLAIEYQNQLFGILHVDKDRVEDCYRLISEETGSHGNRSHKRKFGSLPCSPSGVLELHLSSDSSNDSWPATSSPGPLSKKTKVIHEQLMETLKTHKSAADLLGIPR 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27787416 27788760 + BLOR04989 Blo12g00970 68231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00970 363 Gene3D - 194 283 - -
Blo12g00970 363 CDD CYCLIN 93 185 IPR013763 -
Blo12g00970 363 MobiDBLite consensus disorder prediction 317 335 - -
Blo12g00970 363 Pfam Cyclin, C-terminal domain 195 299 IPR004367 -
Blo12g00970 363 Gene3D - 86 193 - -
Blo12g00970 363 SMART Cyclin_C_2 195 318 IPR004367 -
Blo12g00970 363 PANTHER CYCLIN D3.1 PROTEIN 47 325 - -
Blo12g00970 363 SUPERFAMILY Cyclin-like 61 193 IPR036915 -
Blo12g00970 363 PANTHER CYCLINS 47 325 IPR039361 -
Blo12g00970 363 SMART cyclin_7 98 186 IPR013763 -
Blo12g00970 363 Pfam Cyclin, N-terminal domain 91 193 IPR006671 -
Blo12g00970 363 ProSitePatterns Cyclins signature. 93 124 IPR006671 -
Blo12g00970 363 MobiDBLite consensus disorder prediction 317 336 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00970 Blo17g00869 CCT
Blo12g00970 Blo18g00706 CCT
Blo12g00970 Blo17g00869 ECH
Blo12g00970 Blo18g00706 ECH
Blo01g01517 Blo12g00970 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00970 Blo-Chr12:27787416 Blo16g00407 Blo-Chr16:15303077 4.64E-82 dispersed
Blo01g01517 Blo-Chr1:54732096 Blo12g00970 Blo-Chr12:27787416 1.90E-167 wgd
Blo12g00970 Blo-Chr12:27787416 Blo17g00869 Blo-Chr17:28497262 2.43E-132 wgd
Blo12g00970 Blo-Chr12:27787416 Blo18g00706 Blo-Chr18:16177412 1.06E-120 wgd
Blo12g00970 Blo-Chr12:27787416 Blo04g01071 Blo-Chr4:15393536 5.13E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00970 K14505 - zju:107419965 401.749