Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00013 ATGGAAGGAGGAGATGAGCTCCACCACCACCATCGCCATCTCCACCACCACAACCGCCCAACCTTCCCCTTTCAATTACTAGAAAAGAAAGACGATGAAGCTTCCTGCTCCAGTTCCGCGTACCCTTCTCTAGCCATTTCCGCAGATCCACCCACCTCTGCCTCCCGTTTGCAGGTCACCCCCTCCACATCGGCAGAGCCGTCCAAGAAGCCTCCGCCCAAACGAACATCGACGAAGGACCGCCACACCAAGGTCGACGGCCGTGGACGCCGCATCAGAATGCCTGCTCTTTGCGCAGCGAGGGTTTTCCAGCTAACCCGAGAGCTGGGCCACAAGTCCGACGGAGAAACCATTGAGTGGCTCCTCCAACAGGCGGAGCCAGCCGTGATCGCAGCTACCGGCACAGGAACAATACCGGCGAACTTCACTTCACTTAATATATCATTAAGAAGCTCCGGCTCAAGCATGTCCGTTCCATCTCAGCTTAGATCATCTTCCTACTATAATCCGAATTTCTCTCTTCAGCAACCGAGAAGAAGTCTTTTTCCGGGAATAGGTTTGTCGCCGGAAAATACATCCACGTTACTGAATTTTCAGTCCAATAGTATGGGTTCTATGCTGCAAGCAAAGCAAGAACTGAGAGATACTTCATTGGAGGTATCTGAGGGGGATGAAGGCACAGGCCGGAAAAGAAGACCGGAGCAAGATTTGTCGCCTCAGCAACAAATGGGTAGCTATTTATTGCAATCAAGTGCCGGAGCAATTCCGGCGACACATGGGGCTCAAATTCCTGCCAATTTTTGGATGCTAACTAATACAAATAACCAAGTCATGGGTGGCGACCCGATTTGGACATTTCCCTCCGTTAGTAATAGTGCTTTGTATAGGGGGACCATGTCTAGTGGGTTACATTTCATGAATTTTCCGACCCCGATGACCTTATTGCCTGGTCAACAATTAGGGTCGGTCATCGGGATTGGTAGCGGCGGTAGCAGTGGCGCCAATGACGGACATTTAAATATGTTGACGGGACTAAACCCGTATCGGTCAACGCAAAATTCAAGCATGTCGGAATCCCCCGGCACCGGTTCCCACTCACACCATGGTGGCGGTGGTAGCAACAGAGATGATGATCGACACGACTCCACGACCAACAAT 1158 51.38 MEGGDELHHHHRHLHHHNRPTFPFQLLEKKDDEASCSSSAYPSLAISADPPTSASRLQVTPSTSAEPSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSSYYNPNFSLQQPRRSLFPGIGLSPENTSTLLNFQSNSMGSMLQAKQELRDTSLEVSEGDEGTGRKRRPEQDLSPQQQMGSYLLQSSAGAIPATHGAQIPANFWMLTNTNNQVMGGDPIWTFPSVSNSALYRGTMSSGLHFMNFPTPMTLLPGQQLGSVIGIGSGGSSGANDGHLNMLTGLNPYRSTQNSSMSESPGTGSHSHHGGGGSNRDDDRHDSTTNN 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 195089 196246 + BLOR05294 Blo13g00013 68408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00013 386 MobiDBLite consensus disorder prediction 37 71 - -
Blo13g00013 386 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Blo13g00013 386 MobiDBLite consensus disorder prediction 370 386 - -
Blo13g00013 386 MobiDBLite consensus disorder prediction 215 236 - -
Blo13g00013 386 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 384 IPR005333 GO:0003700
Blo13g00013 386 MobiDBLite consensus disorder prediction 335 386 - -
Blo13g00013 386 MobiDBLite consensus disorder prediction 72 90 - -
Blo13g00013 386 MobiDBLite consensus disorder prediction 37 90 - -
Blo13g00013 386 Pfam TCP family transcription factor 76 243 IPR017887 -
Blo13g00013 386 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 13 384 - -
Blo13g00013 386 MobiDBLite consensus disorder prediction 335 369 - -
Blo13g00013 386 MobiDBLite consensus disorder prediction 208 241 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00768 Blo13g00013 CCT
Blo04g00768 Blo13g00013 ECH
Blo13g00013 Blo15g00307 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00013 Blo-Chr13:195089 Blo17g00570 Blo-Chr17:10478760 3.18E-41 dispersed
Blo07g00441 Blo-Chr7:8806076 Blo13g00013 Blo-Chr13:195089 1.49E-31 transposed
Blo19g00306 Blo-Chr19:19546337 Blo13g00013 Blo-Chr13:195089 1.55E-31 transposed
Blo13g00013 Blo-Chr13:195089 Blo15g00307 Blo-Chr15:3443093 0 wgd
Blo13g00013 Blo-Chr13:195089 Blo16g01121 Blo-Chr16:39702350 2.88E-94 wgd
Blo13g00013 Blo-Chr13:195089 Blo04g00768 Blo-Chr4:7327486 1.01E-110 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13103 PF03634 TCP 3.20E-40 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00013 - - csv:101221049 488.804