Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g00505 ATGGAAACACGGAGCCGTAAGCGGGCGGAGGCTACCTCAGCAGCCCCTTCTTCTTCTTCGTCTGTTCCCACTACCCGTTCAAACAAACGGTCTCGTCTTTCTGCTACTTCGTCCTCACATTCCAAACAATCTGCCCCGGCTGCTTCATCAATTTCTACTAGGTCCCGTACTTCAAGATTTCAAGAACCAACTGCTGCTGCTACTCCAATGGACTCGACTAATGAATCATCTGGGTCTCGACGGCGGGGGAGAAACTCCGATAAGGATAATTCGGATAAGGGCAAGGAGAAAGAGCATGAGGTTGGAGTTAGGGATAGAGAAAGGGATATTGAGCGAAGCTTAGGATTGAATATTGAAGGTGGTGCTGGTGGAGATGATGATGATAACGACAGTGAGATGGGGGTTGGAATTTTGCACCAGAATTTGACTTCAGCAAGTAGTGCCCTTCATGGGCTTCTTAGGAAGTTGGGGGCGGGTTTGGATGACTTGTTGCCTTCCTCCGCTATTGGGTCTGCTTCAAGTTCCCAACAGAGCGGCCGGCTCAAGAAGATCCTTGCGGGGTTGAGAGCAGATGGGGAAGAAGGTAGGCAGGTGGAGGCACTGACACAACTTTGTGAGATGCTTTCGATTGGGACTGAGGAATCACTGAGTACATTTTCTGTTGATTCTTTTGTTCCTGTCCTGGTGGGGTTGCTTAATCACGAGAGCAATCCTGATATCATGCTCCTGGCCGCCAGGGCACTAACTCATCTTTGTGATGTGCTTCCTTCATCTTGCGCTGCGGTTGTGCATTATGGTGCAGTTTCATGCTTCTGTGCGAGGTTGTTGACAATAGAGTACATGGACTTGGCCGAACAGTCATTGCAGGCTCTAAAGAAGATATCACAGGAACACCCAACTGCCTGTCTGCGAGCTGGTGCTCTAATGGCTGTGCTTTCTTATCTGGATTTCTTCTCCACTGGAGTTCAGAGAGTAGCATTATCTACTGCTGCAAACATGTGTAAAAAGCTTTCTTCAGATGCAGCTGACTTTGTTATGGAAGCTGTTCCGCTGTTGACTAACCTTCTGCAGTATCATGATTCAAAGGTGTTGGAGCATGCTTCAGTCTGTTTGACTCGGATTGCTGAAGCATTTGCATCATCTACTGATAAATTAGATGAATTGTGTAATCATGGACTAGTGGCGCAAGCTGCCTCACTTATATCTGCCAGCAATTCTGGAGGTGGTCAGGCATCTCTCAGCATACCTACTTATACGGGATTAATTAGACTTCTTTCCACCTGTGCAAGTGGGTCCCCATTAGGGACTAAAACGCTTCTTCTTCTTGGCATCAGTGGTATTCTCAAAGGTATTCTTTCTGGTTCTGGCACAGCTGCAAATGTATCTGTTTCACCTGCTTTAAGTAGACCGCCAGAGCAGGGATTGAGAATAAAAGTAATGACTTTCAATATTATTTTTGAAATTGTCAATCTAGCAAATGAGCTTCTACCACCACTACCCCAAGGAACCATATCCCTTCCTGCAAGTTTTTTGTTTGTGAAAGGATCTGCTATGAAAAAGTCTTCTGCTAGTGGTTCTGGGAAACAAGAAGAAACAAATTGTTCAAATCCTGAGGTCTCAGCTCGTGAAAAACTCTTAAATGATCAACCTGAGCTTCTTCAGCAATTTGGAATGGATCTTCTTCCAATTTTAATACAGATCTACGGGTCAAGTGTCAATGGGCCTGTTCGCCACAAATGTCTCTCAGTTATTGGGAAATTGATGTACTTCAGTTCTTCAGAGATGATCCAATCTCTATTAAATGTAACAAATATATCAAGTTTTTTAGCTGGTGTTTTAGCATGGAAAGATCCTCATGTCTTGATTCCTGCTCTTCAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGAAACTTTTGCAAAGATGTTTGTTAGAGAAGGAGTGGTCCATGCAGTGGACCAACTTGTCTTAGTTAATAATCAAAATAATACTCCTACTCAAGTATCTTCCACTGAGAAAGATAATGATCCTGGAACTGGAACATCATCTCGTACTCGGCGTTATAGACGTCGTAACAGTAATGCAAATCCAGATGGAAGTATATTGGATGAGTCTAAGAATAGTTCTGGAAATGTTGGTTCACCTCCAAGCTCAATAGAAGTTCCATCTGTTAATTCCAATATTCGGTTAGCGGTTAGTGGTTGTGCTACCGCATTCAAGGACAAGTACTTCCCTTCAGATCCTGGAACCACCGAAGTTGGAGGGACTGATGATCTTTTGCATTTGAAGAATCTTTGTAGGAAGTTGAATTTAGGTATTGATGACCAACGCACAAAAGCAACCGGGAAGTCAAAAGCCTTTGAGTCTCACTTGTTTGATAACTCTACGAATAAGGAAGAATACCTATCTGGTGTTATATCAGAGATGCTAGTTGAACTTGGCAAAGGGGACGGTGTATCCACTTTTGAGTTTATTGGAAGTGGTGTTGCTGCAGCTTTGCTGAATTATTTTTCTTGTGGATACTTTTTGAAGGAGAAAATTTCAGAAGCCAATCTGCCAAAGCTTCGTCAGCAGGCACTTAAAAGATTCAAATCATTTGTTGCTGTAGCACTTCCTTCCGATGCTTCTGAGGGTACTTTGGCTCCTATGGCTGTTTTGGTTCAGAAACTTCAAAATGCTTTATCCTCCTTGGAGCGTTTCCCGGTTGTCTTAAGGCAGTCATCTAGGTCATCTAGTGGAAGTGGTCGTCTTTCCTCTGGATTAAGTGCATTATCTCAACCTTTTAAGTTGCGTCTGTGTCGAGCTCACGGAGAGAAAAATCTCCGTGATTATTCTTCAAATGTTGTGCTCATTGATCCCTTAGCCAGTTTAGCAGCTGTTGAAGAGTTTCTTTGGCCTCGTGTACAGCGAGGTGATACTGGTCAAGAGCCTGCATTATCTACTGGAAATTCAGAGTTGGGAACCACTTCTGGAGTTGCTGGTTCATCTCCATCCACAACCACTCCTGCTTCAGCGACTCGTCGTCACTCTACTAGGTCGAGATCCTCAGTGAACATAGGAGATGGAGCTAAGAAGGAATTATCTGAAGAGAAAAGCACAAGTTCATCTAAAGGAAAAGGTAAGGCTGTTATGAAGCCTGCTCAGGAGGAAGCAAGAGGGCCTCAAACTAGGAATTCTTCTCGTAGGAAAGCAGCTATAGACAAGGATGCTCGGAAACCAGTTAATGGGGAGACTTCGTCTGAGGACGAGGAATTGGATGCATCTTTTGTTGAGATTGATGATGCATTAGTTATTGAAGATGATGATATCTCAGATGACGAAGATGATGATCATGATGAGGTCCTAAGAGCTGAGTCCCTTCCTGTTTGTATACCTGAAAGAGTACATGACGTTAAGTTGGGTGATGCAGCTGAGGAAAGTAATGTTGCTCCAGTAACTGCTGATAGCCATGTCAACCCTGCTTCCGGTTCAAGTAGCAGAATTGCTACAGTTAGGGGCTCAGATTCTAATGATCATAGGAGTAGCAATTCTTATGGTTCACGGGGTGCAATGTCATTTGCCGCTGCTGCTATGGCTGGGCTTCGATCTGGTAATGGTAGAGGTTTTAGAGGAGGTCGAGACAGGCATGGTCGTCCTCTCTTTGGTAGCTCTAATGATCCGCCAAAGTTGGTTTTTACTTCTGGTGGGAAGCAGCTTAATAGGCATTTAACCATTTACCAGGCTATCCAGAGACAACTTGTTTTGGATGAGGATGACGATGAGAGATATGCTGGTAGTGATTTCTTGTCTAGTGATGGAAGTAGGCTATGGAGTGACATATATACTATTACATACCATAAAGCTGAAAATCAAGCAGATAGAATGTCTACTGGGGGATCCAATACTTCTGCTGCCTCAAAATCTACCAAATCTGGTTCTGCTTCCAATTCTAACTCTAATTTGCAGAGGGTGTCACTTCTAGATAGCATTTTGCAGGCGGAGCTTCCTTGTGATATGGAAAAGTCTAATCCTACTCATAGTATATTGGCATTGTTGCGTGTTTTAGACACTTTGAACCAACTTGCACCTCGTTTGAGAGCGCAGATAGTTTCTGATCGTTTTGCAGAGGGTAAACTCTTCAGTCTTGATGAGCTAAGTGCTGCTGGCGCAAGGGTCCTTCCTGATGAGTTCATTAATAGCAAGCTTACTCCTAAATTAGCGCGACAAATTCAAGATGTCCTTGCATTATGCAGCGGAAGTCTCCCTTCATGGTGTTATCAGTTGACGAAAGCTTGTCCATTTTTGTTTCCTTTTGAAACCCGGCGACAATATTTCTATTCAACTGCTTTTGGGTTATCACGTGCTTTGTATCGCCTTCAGCAGCAGCAGGGTGCTGATGGTCTTGGAATGGGAAGTGAAAGAGAGGTGAGGGTTGGGAGGTTACAGCGCCAAAAAGTTCGTGTGTCTAGAAACCGTATTTTAGATTCTGCAGTGCAAGTAATGGAAATGTATTCTAGTCAAAAGGTAATGCTGGAAGTAGAGTATTTTGGTGAAGTTGGAACTGGGTTGGGCCCTACACTTGAGTTTTATACACTTATAAGTCATGACCTACAAAAAGCTACTCTTGGAATGTGGAGATCAAATTCCTCGTCTGATAGATCTATGGAAATTGATGGGGATGAACTGAAAGATGAAAAAATCAACTCTGCTGGATTTGGTTCCATGGTAAGCAATTCAGACTCCATACATGCTCCGCTTGGATTGTTCCCTCGCCCCTGGTCTCCAAATTCGGATGTTTCAAATGGTAGCCAATTTTCTAAAGTAATAGAGTATTTCCGATTAGTTGGTCGTGTGATGGCCAAAGCACTTCAGGATGGGCGATTATTGGACCTACCACTGTCAACAGCATTCTATAAGCTGGTGCTTGGTCAAGAGCTCGATTTGCATGATATTCTTTCATTTGATACTGAATTTGGCAAGATTTTGCGAGAGTTGCATGTACTTGTTTGTCGGAAACAATACCTAGAATCACCAGGTGGTGATAATCATGAAGCAATTGTCAACTTGCGTTTTCGCGGGACTTCAATTGAGGACCTGTACTTGGATTTTTCACTTCCCGGTTACCCAGATTACATTTTGAAGCAAGGAGATGAAAATGTCAATATCAACAACCTGGAGGAGTACGTGTCCTTGGTAGTTGATGCAACCGTCAAGACTGGAATCATGCGCCAAATTGAAGCATTTAGAGAAGGATTTAACCAGGTCTTTGACATCTCTTCGTTGCAAGTATTTACTCCAAATGAGCTAGATAATTTGCTTTGTGGTCGGCGAGAGTTATGGGAGGCCGACACCCTTGCTGATCACATAAAATTTGATCATGGCTACACTGCAAAGAGCCCTGCCATAGTAAATTTACTCGAGATCATGGGAGAGTTCACTCCTGAGCAGCAGCGAGCCTTTTGCCAGTTTGTTACTGGTGCACCTCGGCTTCCTCCTGGTGGGTTGGCTGTTCTGAACCCAAAACTTACAATCGTGAGAAAGCATTCTTCAACCGCTACTAATGTTACAACTAATGGAACTGGGTTGTCCGAATTAGCAGATGATGACTTGCCTAGTGTTATGACTTGTGCCAATTACCTGAAGCTTCCTCCTTACTCAACTAAGGAGGTGAATGGGATTGAAATTTATTCAGGAGGGGATGCTTGGTTGCGGAGAACTTGTAAAAGGATCAAATGTCATATAGATAATGTGCTTGGGAGTGTTGGGTCATTGACGATAGATGTCTTGAACAATTGTTTTTTAATATTTTGTTTGTACATGAAATTAATGAGTGAAGGCAAGCACGACATATGTAGTTTTGCTCATGATACGTTGGGTATTAGGATTAATGTTATTAATGTGAAGGAGAAAACATTGCCAGATGAACTCTTGGGTTATCAGCTGGAAGATGCTGGAAAAGATGTTCAACCGAAAGAAATTGAACATCGCTATGCAATTTTAAGTCACATGTACGAGGTCCTCAACAACTCGTTCAAGAGTCTATCATTTAATTGGCTCGTTCAGAGGATTGTTGAGCATAACGGGATACTGGTCTCGAATGAGGAGCCAAGAATTGAAGAGAAGGCCGCTGACGTCTACAACAAATTGAAAGTGGACCGCATGGGGATCTCCAAAGTCGGAGGGGAATGGATATGCAAAACTCCATCCAAGCCCGCCTTGAAGACTTGA 6207 43.31 METRSRKRAEATSAAPSSSSSVPTTRSNKRSRLSATSSSHSKQSAPAASSISTRSRTSRFQEPTAAATPMDSTNESSGSRRRGRNSDKDNSDKGKEKEHEVGVRDRERDIERSLGLNIEGGAGGDDDDNDSEMGVGILHQNLTSASSALHGLLRKLGAGLDDLLPSSAIGSASSSQQSGRLKKILAGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLSSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSTDKLDELCNHGLVAQAASLISASNSGGGQASLSIPTYTGLIRLLSTCASGSPLGTKTLLLLGISGILKGILSGSGTAANVSVSPALSRPPEQGLRIKVMTFNIIFEIVNLANELLPPLPQGTISLPASFLFVKGSAMKKSSASGSGKQEETNCSNPEVSAREKLLNDQPELLQQFGMDLLPILIQIYGSSVNGPVRHKCLSVIGKLMYFSSSEMIQSLLNVTNISSFLAGVLAWKDPHVLIPALQIAEILMEKLPETFAKMFVREGVVHAVDQLVLVNNQNNTPTQVSSTEKDNDPGTGTSSRTRRYRRRNSNANPDGSILDESKNSSGNVGSPPSSIEVPSVNSNIRLAVSGCATAFKDKYFPSDPGTTEVGGTDDLLHLKNLCRKLNLGIDDQRTKATGKSKAFESHLFDNSTNKEEYLSGVISEMLVELGKGDGVSTFEFIGSGVAAALLNYFSCGYFLKEKISEANLPKLRQQALKRFKSFVAVALPSDASEGTLAPMAVLVQKLQNALSSLERFPVVLRQSSRSSSGSGRLSSGLSALSQPFKLRLCRAHGEKNLRDYSSNVVLIDPLASLAAVEEFLWPRVQRGDTGQEPALSTGNSELGTTSGVAGSSPSTTTPASATRRHSTRSRSSVNIGDGAKKELSEEKSTSSSKGKGKAVMKPAQEEARGPQTRNSSRRKAAIDKDARKPVNGETSSEDEELDASFVEIDDALVIEDDDISDDEDDDHDEVLRAESLPVCIPERVHDVKLGDAAEESNVAPVTADSHVNPASGSSSRIATVRGSDSNDHRSSNSYGSRGAMSFAAAAMAGLRSGNGRGFRGGRDRHGRPLFGSSNDPPKLVFTSGGKQLNRHLTIYQAIQRQLVLDEDDDERYAGSDFLSSDGSRLWSDIYTITYHKAENQADRMSTGGSNTSAASKSTKSGSASNSNSNLQRVSLLDSILQAELPCDMEKSNPTHSILALLRVLDTLNQLAPRLRAQIVSDRFAEGKLFSLDELSAAGARVLPDEFINSKLTPKLARQIQDVLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGLGMGSEREVRVGRLQRQKVRVSRNRILDSAVQVMEMYSSQKVMLEVEYFGEVGTGLGPTLEFYTLISHDLQKATLGMWRSNSSSDRSMEIDGDELKDEKINSAGFGSMVSNSDSIHAPLGLFPRPWSPNSDVSNGSQFSKVIEYFRLVGRVMAKALQDGRLLDLPLSTAFYKLVLGQELDLHDILSFDTEFGKILRELHVLVCRKQYLESPGGDNHEAIVNLRFRGTSIEDLYLDFSLPGYPDYILKQGDENVNINNLEEYVSLVVDATVKTGIMRQIEAFREGFNQVFDISSLQVFTPNELDNLLCGRRELWEADTLADHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTATNVTTNGTGLSELADDDLPSVMTCANYLKLPPYSTKEVNGIEIYSGGDAWLRRTCKRIKCHIDNVLGSVGSLTIDVLNNCFLIFCLYMKLMSEGKHDICSFAHDTLGIRINVINVKEKTLPDELLGYQLEDAGKDVQPKEIEHRYAILSHMYEVLNNSFKSLSFNWLVQRIVEHNGILVSNEEPRIEEKAADVYNKLKVDRMGISKVGGEWICKTPSKPALKT 2068
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 26382024 26394906 - BLOR05786 Blo13g00505 68900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g00505 2068 SMART hect_3 1490 1887 IPR000569 GO:0004842
Blo13g00505 2068 MobiDBLite consensus disorder prediction 1197 1222 - -
Blo13g00505 2068 Gene3D Hect, E3 ligase catalytic domains 1417 1664 - -
Blo13g00505 2068 Gene3D - 169 473 IPR011989 -
Blo13g00505 2068 ProSiteProfiles HECT domain profile. 1500 1883 IPR000569 GO:0004842
Blo13g00505 2068 MobiDBLite consensus disorder prediction 660 722 - -
Blo13g00505 2068 SMART arm_5 338 376 IPR000225 GO:0005515
Blo13g00505 2068 SMART arm_5 295 335 IPR000225 GO:0005515
Blo13g00505 2068 SMART arm_5 212 253 IPR000225 GO:0005515
Blo13g00505 2068 Pfam HECT-domain (ubiquitin-transferase) 1525 1883 IPR000569 GO:0004842
Blo13g00505 2068 SUPERFAMILY ARM repeat 180 656 IPR016024 -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 694 722 - -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 660 682 - -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 974 1018 - -
Blo13g00505 2068 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 44 1883 IPR045322 GO:0006511|GO:0061630
Blo13g00505 2068 Gene3D Hect, E3 ligase catalytic domain 1773 1885 - -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 1285 1312 - -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 1 133 - -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 77 114 - -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 1147 1179 - -
Blo13g00505 2068 SUPERFAMILY Hect, E3 ligase catalytic domain 1470 1883 IPR035983 GO:0004842
Blo13g00505 2068 MobiDBLite consensus disorder prediction 1055 1079 - -
Blo13g00505 2068 MobiDBLite consensus disorder prediction 971 1086 - -
Blo13g00505 2068 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 44 1883 - -
Blo13g00505 2068 CDD HECTc 1477 1883 IPR000569 GO:0004842
Blo13g00505 2068 MobiDBLite consensus disorder prediction 10 76 - -
Blo13g00505 2068 Gene3D - 540 665 IPR011989 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00566 Blo13g00505 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00457 Blo-Chr12:22133149 Blo13g00505 Blo-Chr13:26382024 1.17E-20 dispersed
Blo13g00505 Blo-Chr13:26382024 Blo03g00217 Blo-Chr3:4926281 5.72E-27 dispersed
Blo13g00505 Blo-Chr13:26382024 Blo04g00566 Blo-Chr4:4867342 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g00505 K10590 - zju:107427509 2726.04