Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00288 ATGGATCCTCCGCTAGTTAATGAGACTTCATTCTCGACCGTCAACCCATCCGTATACAGCTTGGCTGAGATTTGGCCGTTCGGGGAAGAAGCAGAAGGTGGTGTGTTGGGGCTCCGAATCGGTAGTTTGTGTCGAAATCTTGGTGGGTTTGCTGAGGGATCCGGAAATCGGGATGGGTCGGCGGAGGAATCGACGGTGACTGAGCAAAGCGGCAGCGGAGGGAGGAGGAAGAGGAAGGATGTGAGCTCAGAGGACGAATCTTCGAAAATGGTTCCCAAAAGTGGTGCTACTTACTTGAATGATTTCAATGGTAAACTGATGAAATTGGGAGAATCCAGAGATGAAAATTGTCGCCCAAAAGCTGAAGTAGAAGTTGAAACAAACTCGGGCGATGGGACCAAGCCCGACGAACCAAGTGCCAAGCCGTCCGTGCCACCTAAAGATTATATTCATGTGAGAGCAAGAAGAGGCCAAGCAACCGATAGCCACAGTCTAGCAGAAAGAGCGAGGAGAGAGAAAATCAGCGAGAGAATGAAAATTCTCCAAGAGTTGGTGCCGGGATGTAACAAGGTAACTATCACCGCCCGGCTCGTCAAATTATTTGAGCATCACAAACTTACTCTTTGGCTGCAGGTCATAGGGAAGGCATTCGTCCTCGACGAGATTATCAACTACATTCAATCTCTGCAGCATCAAGTTGAGTTCCTGTCCATGAAGCTCGAAGCGGTTAATTCGAGAATGAACGTGATTCCAGGCATAGAAGGCCATACTACCAAGGATAATGGACTGCAGCCATTTGATGGTGCAGGAATGGTGTACGGGACGGAGGCTATACCGAGAGAATATGGTCAAGGCTTACACCATGAATGGCTGCACATGCATATTGGCGGTGGGTTTGAAAGAGCAAATTAA 912 48.57 MDPPLVNETSFSTVNPSVYSLAEIWPFGEEAEGGVLGLRIGSLCRNLGGFAEGSGNRDGSAEESTVTEQSGSGGRRKRKDVSSEDESSKMVPKSGATYLNDFNGKLMKLGESRDENCRPKAEVEVETNSGDGTKPDEPSAKPSVPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQELVPGCNKVTITARLVKLFEHHKLTLWLQVIGKAFVLDEIINYIQSLQHQVEFLSMKLEAVNSRMNVIPGIEGHTTKDNGLQPFDGAGMVYGTEAIPREYGQGLHHEWLHMHIGGGFERAN 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3173837 3175804 - BLOR06682 Blo15g00288 70688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00288 303 Pfam Helix-loop-helix DNA-binding domain 162 230 IPR011598 GO:0046983
Blo15g00288 303 Coils Coil 226 246 - -
Blo15g00288 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 229 IPR011598 GO:0046983
Blo15g00288 303 MobiDBLite consensus disorder prediction 110 147 - -
Blo15g00288 303 Gene3D - 158 251 IPR036638 GO:0046983
Blo15g00288 303 MobiDBLite consensus disorder prediction 53 97 - -
Blo15g00288 303 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 211 302 - -
Blo15g00288 303 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 1 195 - -
Blo15g00288 303 MobiDBLite consensus disorder prediction 72 87 - -
Blo15g00288 303 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 211 302 IPR024097 GO:0006355
Blo15g00288 303 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 195 IPR024097 GO:0006355
Blo15g00288 303 MobiDBLite consensus disorder prediction 110 131 - -
Blo15g00288 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 249 IPR036638 GO:0046983
Blo15g00288 303 CDD bHLH_AtBPE_like 148 248 - -
Blo15g00288 303 SMART finulus 164 235 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g00032 Blo15g00288 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00288 Blo-Chr15:3173837 Blo06g00398 Blo-Chr6:23064680 3.38E-44 dispersed
Blo01g00412 Blo-Chr1:4665092 Blo15g00288 Blo-Chr15:3173837 4.15E-74 wgd
Blo13g00032 Blo-Chr13:522851 Blo15g00288 Blo-Chr15:3173837 1.94E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13316 PF00010 HLH 1.50E-05 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00288 - - csv:101215588 368.622