Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00307 ATGGAAGGAGGAGACGAGCTCCACCATCACCACCATCACAACCACCGCCCAACTTTCCCGTTCCAATTGCTGGAAAAAAAAGACGATGAAACTTCCTGCTCCAGCTCCGCCTACCCTTCTCTAGCCATTTCAGCAGATCCGCCCACCTCGTCCACCCGTTTACAAGTCACTGTCGCCACATCAGCGGAGACCTCCAAGAAGCCTCCGCCGAAGAGAACCTCCACAAAGGACCGCCACACTAAGGTCGATGGCCGAGGACGTCGCATCAGAATGCCAGCTCTTTGCGCCGCGAGAGTTTTCCAGCTTACTCGCGAGCTCGGCCACAAGTCCGACGGCGAAACAATCGAGTGGCTCCTCCAACAAGCGGAACCCGCCGTGATCGCAGCAACGGGAACCGGAACAATACCAGCGAACTTCACTTCACTTAACATATCATTAAGAAGCTCCGGCTCAAGCATGTCCGTACCATCTCAACTTAGATCAGTTTCCTACTATAATCCGAATTTCTCCCTTCAGCAACCTAGAAGAAGCCTTTTCCAAGGAATAGGGTTGTCCCCGGAAAACACATCGACGTTACTGAATTTCCAGTCAAACAGTCCGGGTTCTATGCTGCAAGCAAAGCAAGAACTGAGAGACACTACACTAGACCTATCAGAGGGAGACGAAGGAATCGGCCGGAAGAGAAGACCGGAGGAAGATTTATCAACGCAGCATCAAATGGGAAGTTATTTCCTGCCGTCGACCGCAGCAGCCATTCCAGCTACACACGGAGCCCAAATTCCGGCAAACTTCTGGATGCTTACTAATCCCAATAACCAAGTAATGGGTGGCGACCCAATTTGGACATTTCCTTCGGTTAATAATAGTGGTTTGTATAGAGGGAACATGTCTAGTGGGTTACATTTCATGAATTTTTCCACCCCGGTGACAATATTGCCCGGCCAGCAATTAGGGTCAGCCATCGGAATATCCGGCAACGGCGGTGGTCCGAGCGAGGAACATTTAAGTATGTTGACAGGGTTAAACTCGTACCGATCAATGCAAATTTCAGACATGATGGAATCTCCCAGGACTCGATCTCAGTCACACCACGGAGCAAGTGGTAGCGGCGGAGGTGATGATCGGCACGACTCAACTAGTCACCAATCA 1149 50.91 MEGGDELHHHHHHNHRPTFPFQLLEKKDDETSCSSSAYPSLAISADPPTSSTRLQVTVATSAETSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSVSYYNPNFSLQQPRRSLFQGIGLSPENTSTLLNFQSNSPGSMLQAKQELRDTTLDLSEGDEGIGRKRRPEEDLSTQHQMGSYFLPSTAAAIPATHGAQIPANFWMLTNPNNQVMGGDPIWTFPSVNNSGLYRGNMSSGLHFMNFSTPVTILPGQQLGSAIGISGNGGGPSEEHLSMLTGLNSYRSMQISDMMESPRTRSQSHHGASGSGGGDDRHDSTSHQS 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3443093 3444241 - BLOR06701 Blo15g00307 70707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00307 383 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
Blo15g00307 383 MobiDBLite consensus disorder prediction 218 237 - -
Blo15g00307 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 382 IPR005333 GO:0003700
Blo15g00307 383 MobiDBLite consensus disorder prediction 352 367 - -
Blo15g00307 383 MobiDBLite consensus disorder prediction 33 68 - -
Blo15g00307 383 MobiDBLite consensus disorder prediction 369 383 - -
Blo15g00307 383 MobiDBLite consensus disorder prediction 1 85 - -
Blo15g00307 383 Pfam TCP family transcription factor 73 239 IPR017887 -
Blo15g00307 383 MobiDBLite consensus disorder prediction 69 85 - -
Blo15g00307 383 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 12 382 - -
Blo15g00307 383 MobiDBLite consensus disorder prediction 18 32 - -
Blo15g00307 383 MobiDBLite consensus disorder prediction 218 235 - -
Blo15g00307 383 MobiDBLite consensus disorder prediction 352 383 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00768 Blo15g00307 CCT
Blo04g00768 Blo15g00307 ECH
Blo13g00013 Blo15g00307 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00008 Blo-Chr8:81148 Blo15g00307 Blo-Chr15:3443093 6.09E-27 dispersed
Blo10g00401 Blo-Chr10:6870883 Blo15g00307 Blo-Chr15:3443093 6.45E-39 dispersed
Blo15g00307 Blo-Chr15:3443093 Blo16g01121 Blo-Chr16:39702350 1.55E-86 dispersed
Blo13g00013 Blo-Chr13:195089 Blo15g00307 Blo-Chr15:3443093 0 wgd
Blo15g00307 Blo-Chr15:3443093 Blo04g00768 Blo-Chr4:7327486 5.64E-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13320 PF03634 TCP 2.10E-39 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00307 - - csv:101221049 499.59