Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g00063 ATGATGGGCTTCCTTCGATTGTACTCTACAATTCATGCTTTTAGCTTTGGCTTTACTTTTGGGTTTATTTTGGCTGCGAAGATAGAAAGCGAACGAAGGTGGTGGAGATGGAGGAACGCGATCTTCGGAAGGGAAAGACCCGTAATATTAGTCAAAAAGGAATGGGGCCATTTCTTACCCAAAAGGAAAAGTAAAGACGACACTCATGCAAAGCTGGGCGAAGTGAAAATGGAATGCGTAGAGTTGGCGTTGAAATCTAGCTTTAGGAAGAAGATGTCTATGAACTTGAGCCCTCAGCTACGTTGGGATGATTTGGGGTCGTTCAGTGTCCAAAATGTCGTTTCCTGTGATGAATTTTCTGTAGACGAACTCCTCAATTTCTCTAACGAAGATGGATCTGAAGGGCAAGAGAATGGAGAAGAAGAAGGAGAAGGAGAAAAAAACGAAGACCATGAGGGCTTTGCTTGTGTCTCTGTTTCTCCACAGGAACCGGAAGACTACGAAAACCCAAATGAAAGTTTTTCTGTTCCAGACGGATTTGGGTCTCTGCCCACGAGTGAGCTCAGTGTTCCGACGGATGATTTGGCAGACCTCGAATGGTTGTCCAATTTCGTTGATGATTCTTTCTCCGAACACTCTGCGCCATTTCCGGCTGGAATTTGGACAGGAAAGCCGAAGCAGAGTGAACTAGAGAGAGAGACGAAGGATTTTACTCCCTCGCAGCATTGTTTCAAAACTCCGATTCCGGCGAAGGCGAGAAGCAAGCGGTCGAGAACCGGAGGCCGGGTCTGGGTTCTCGGATCCTCGTCGTTAACGGAATCTTCCGCAAGCTCAACTACGTCATCGTCTTCCTCTTCATCACCCTCAAGCCCTTTGCTTTTATACAACACCGTGGTTCCTCTCCCCGACGAGACAGTTTTTCGGTACGAAAAGCCGCCGGCGAAGAAACCGAAGAAAAGGTCACCAGTCAACGGAAATGTCGGAAGTGGTACCATGCAGACAACTCGCCGGTGCAGCCATTGCGGCGTTCTGAAAACACCACAATGGAGAGCCGGTCCACTCGGAGCAAAGACACTCTGCAACGCATGTGGCGTTCGATACAAGTCGGGTCGACTCCTACCCGAATACAGACCGGCGTGCAGCCCAACATTTTCAGGCGAACTACACTCAAATCACCACCGCAAAGTCCTGGAAATGCGGCGGAAGAAGGACGACCCAGGACTTCCAGAGCCGGGCTTAACCCCTCCTCCGGTTGTTCCCAGTTTTTAA 1269 49.33 MMGFLRLYSTIHAFSFGFTFGFILAAKIESERRWWRWRNAIFGRERPVILVKKEWGHFLPKRKSKDDTHAKLGEVKMECVELALKSSFRKKMSMNLSPQLRWDDLGSFSVQNVVSCDEFSVDELLNFSNEDGSEGQENGEEEGEGEKNEDHEGFACVSVSPQEPEDYENPNESFSVPDGFGSLPTSELSVPTDDLADLEWLSNFVDDSFSEHSAPFPAGIWTGKPKQSELERETKDFTPSQHCFKTPIPAKARSKRSRTGGRVWVLGSSSLTESSASSTTSSSSSSSPSSPLLLYNTVVPLPDETVFRYEKPPAKKPKKRSPVNGNVGSGTMQTTRRCSHCGVLKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSGELHSNHHRKVLEMRRKKDDPGLPEPGLTPPPVVPSF 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1975158 1977009 + BLOR07311 Blo16g00063 71254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g00063 422 MobiDBLite consensus disorder prediction 400 422 - -
Blo16g00063 422 MobiDBLite consensus disorder prediction 310 334 - -
Blo16g00063 422 PANTHER GATA TRANSCRIPTION FACTOR 77 407 - -
Blo16g00063 422 MobiDBLite consensus disorder prediction 164 188 - -
Blo16g00063 422 Gene3D - 329 404 IPR013088 GO:0006355|GO:0008270
Blo16g00063 422 PANTHER GATA TRANSCRIPTION FACTOR 77 407 - -
Blo16g00063 422 MobiDBLite consensus disorder prediction 127 188 - -
Blo16g00063 422 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 332 393 - -
Blo16g00063 422 CDD ZnF_GATA 337 386 IPR000679 GO:0006355|GO:0043565
Blo16g00063 422 Pfam GATA zinc finger 338 372 IPR000679 GO:0006355|GO:0043565
Blo16g00063 422 ProSiteProfiles GATA-type zinc finger domain profile. 332 368 IPR000679 GO:0006355|GO:0043565
Blo16g00063 422 SMART GATA_3 332 386 IPR000679 GO:0006355|GO:0043565
Blo16g00063 422 ProSitePatterns GATA-type zinc finger domain. 338 363 IPR000679 GO:0006355|GO:0043565
Blo16g00063 422 MobiDBLite consensus disorder prediction 216 259 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00899 Blo16g00063 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00130 Blo-Chr12:9079273 Blo16g00063 Blo-Chr16:1975158 2.27E-36 dispersed
Blo13g00925 Blo-Chr13:31728275 Blo16g00063 Blo-Chr16:1975158 2.16E-36 dispersed
Blo16g00063 Blo-Chr16:1975158 Blo05g00081 Blo-Chr5:801274 2.69E-46 dispersed
Blo02g00646 Blo-Chr2:15245325 Blo16g00063 Blo-Chr16:1975158 1.15E-62 transposed
Blo16g00063 Blo-Chr16:1975158 Blo04g00899 Blo-Chr4:10469409 1.46E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13365 PF00320 GATA 2.20E-16 CL0167 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g00063 - - zju:107410110 326.635