Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01129 ATGCAGCGGCTACACTTGCTATCTTCTTCTTCTTCTTCATTAGCCGCTCCTCAAAACCCTGAAACTTGTCCTTTCCTTAAGCTTTCCTCCAACTATCCGTCTAGAAGCTTTGTTTTCAACTTCAATGCCTACCGGCCTCTTCCGACTCACTCCTCAAGAAGGAGGCTGTCTTTGAAATGCCGGTACTCTGAGTACTTCGACCAGCAGCAGAAGAAGCAGTCGGGGATCGACGCTGGAACTTCTCCGAGTAACAATTCTGCTCCACAGTCTCGGCCTGGAGCAGCTGGAGCATCTCCACCTAGGTTCTTCGTGGGTCATTCAATATACAAAGGGAAGGCAGCTCTTACGGTGGAGCCACGAGCACCAGAGTTTACTTCTCTAGACTCAGGAGCATTCAAGCTATCAAAGGAGGGCGTTGTCGTTCTTCAGTTTGCTCCCGCAGTTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCTTTGTCAACGACAGAAATTGGGAGTCTTGTTGCCCTCGGCCCAAGAGAGTCGTGTGAATTTTTCCATGACCCTTTTAAGGGAAAAAGTGAAGAAGGGAAAGTTAGGAAGGTATTGAAAGTGGAGCCCCTGCCAGATGGTTCTGGTCATTTCTTCAACATCAGTGTTCAGAACAAGCTTATCAACATGGACGAGAGTATTTATATTCCCGTCACCAAAGCAGAATACGCTGTACTTGTGTCAGCATTCAATCAATACCTGAACAGTGGTGTTGCTAAAGATCACACAAAAATGACGGCCACTGCAACATTACTCGGGAGTCCTTCAACCCAAAACAACAGAAGAATCCACAATGTAGGAGTAGTGACCAAAAAGAAGAACCAAATTAATTCTCAAAATCACGCAAGAACAGTGAGCAAAATAGGGACCCAATACCTAATCGAGTTGCAAGGGGCTTTGATTCGTCTTCACAGAGACAGGGTGTTTCGCCAAGCTCGGGGAACCCTTCACAGAGCAGGGTTTGTCTTCACCCAACAGAAGGTCGCTTCACAGAGTCGGGCTTTGCTTCAAGCCGTCGTCTTCGCCTTCGTGCTTCGAAGAAAAGAGAAGAGCGAGTTTCGAAGAGGAGAGAAGAGTTGTTGCAGAGGTCTTCCGGAGATTAAAACAAACGGCAATAAACGGAAGGCTTTTAACTGTTTGAGTATGGTTTCTGCAGATTGGGATATGGATCTAGGGTTTTGTACGTTGATATGGCTGGAGGCGGTGAGGATGTCAACTCCTTCAAGAAAGAGACTGATGAGAGATTTCAAGAGGTTGCAACAAGATCCTCCAGCTGGAATTAGTGGTGCTCCTCAAGACAATAATATCATGCTTTGGAATGCTGTGATATTTGGACCTGATGACACACCTTGGGATGGAGGTACGTTCAAGCTGACACTTCAGTTTACGGAGGATTATCCAAACAAACCCCCCACTGTGCGCTTTGTTTCTAGGATGTTTCACCCAAATATTTACGCAGATGGGAGCATTTGTTTGGACATTCTTCAAAACCAGTGGAGTCCAATATATGATGTTGCTGCTATCCTCACCTCCATACAGTCGTTGCTCTGTGATCCAAACCCCAACTCTCCAGCAAATTCTGAAGCTGCTCGCATGTTCAGCGAGAACAAACGGGAGTACAACAGAAGAGTAAGAGAAATCGTCGAACAGAGCTGGACTGCCGATTAG 1710 46.32 MQRLHLLSSSSSSLAAPQNPETCPFLKLSSNYPSRSFVFNFNAYRPLPTHSSRRRLSLKCRYSEYFDQQQKKQSGIDAGTSPSNNSAPQSRPGAAGASPPRFFVGHSIYKGKAALTVEPRAPEFTSLDSGAFKLSKEGVVVLQFAPAVGVRQYDWSRKQVFSLSTTEIGSLVALGPRESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNISVQNKLINMDESIYIPVTKAEYAVLVSAFNQYLNSGVAKDHTKMTATATLLGSPSTQNNRRIHNVGVVTKKKNQINSQNHARTVSKIGTQYLIELQGALIRLHRDRVFRQARGTLHRAGFVFTQQKVASQSRALLQAVVFAFVLRRKEKSEFRRGEKSCCRGLPEIKTNGNKRKAFNCLSMVSADWDMDLGFCTLIWLEAVRMSTPSRKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39821002 39829267 - BLOR21916 Blo16g01129 72320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01129 569 Gene3D Transcriptional Coactivator Pc4; Chain A 93 250 IPR009044 GO:0003677|GO:0006355
Blo16g01129 569 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 421 567 IPR000608 -
Blo16g01129 569 SUPERFAMILY ssDNA-binding transcriptional regulator domain 100 248 IPR009044 GO:0003677|GO:0006355
Blo16g01129 569 Pfam Ubiquitin-conjugating enzyme 425 561 IPR000608 -
Blo16g01129 569 CDD UBCc 424 562 IPR000608 -
Blo16g01129 569 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 408 569 - -
Blo16g01129 569 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 408 569 - -
Blo16g01129 569 SUPERFAMILY UBC-like 411 567 IPR016135 -
Blo16g01129 569 Gene3D Ubiquitin Conjugating Enzyme 416 565 IPR016135 -
Blo16g01129 569 MobiDBLite consensus disorder prediction 69 92 - -
Blo16g01129 569 SMART ubc_7 424 567 - -
Blo16g01129 569 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 494 509 IPR023313 -
Blo16g01129 569 MobiDBLite consensus disorder prediction 69 97 - -
Blo16g01129 569 Pfam Whirly transcription factor 108 242 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00420 Blo16g01129 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01242 Blo-Chr3:38647699 Blo16g01129 Blo-Chr16:39821002 6.50E-19 dispersed
Blo11g00090 Blo-Chr11:701684 Blo16g01129 Blo-Chr16:39821002 1.12E-24 dispersed
Blo12g00810 Blo-Chr12:26465242 Blo16g01129 Blo-Chr16:39821002 5.30E-40 dispersed
Blo16g01129 Blo-Chr16:39821002 Blo15g00379 Blo-Chr15:5286804 6.62E-38 dispersed
Blo02g00109 Blo-Chr2:792224 Blo16g01129 Blo-Chr16:39821002 1.04E-09 transposed
Blo04g00314 Blo-Chr4:2469387 Blo16g01129 Blo-Chr16:39821002 3.31E-29 transposed
Blo04g01062 Blo-Chr4:15246956 Blo16g01129 Blo-Chr16:39821002 1.35E-28 transposed
Blo14g00289 Blo-Chr14:2890769 Blo16g01129 Blo-Chr16:39821002 2.23E-34 transposed
Blo01g00420 Blo-Chr1:4731886 Blo16g01129 Blo-Chr16:39821002 4.56E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13473 PF00179 UQ_con 2.50E-51 CL0208 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01129 K10573 - mnt:112091579 320.087