Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00080 ATGACCGAGAACTTTGAGATACCAGATGTGGCAGATGGCGAGAAGGTTGATCATGGCATAATCGGGAGGTCCTGTCAATCACAGTTCTTTGATATCATGCGAAAGACGGCCTCTGGGAAACTGTTGACTGACTGGGACATATCAGGAGGGAAACATTTCTGCAACTTCAGTGGAATAAGTTGCAACGAGCAAGGTTATGTTCATGGGATTGATGTCTCAAGCTCATCACTGCATGGCATTTTTCCGGCAGATGTTTGCTCTTACCTACCAGAGTTACGTGTTCTTCGTCTAACCAGAAGCGGTCTTTGGGGTAGCTTTCCTCCGGGCATCACCAACTGCTCTCTCTTAGAAGAACTTGAAATGAGTTTTCTCTATCTCAGTGGAAAAATTCCAGATTTTTCACTAATGAAATCTCTTCGGATGCTTGACCTGTCTTATAATCACTTTACTGGTGAGTTCCCCATGTCTATATTCAGCCTACACAACCTTGAGAAGGTTAATTTCAATGAAGTTAATACTTTGAATCCATGGCAACTCCCGGAGAATATTTCCAAGCTCATAAAACTCGAAACCATGATTTTGACATCGTGCAAGCTGCATGGTAAGATCCCAAGATCCATAGGAAACTTGACGTCTCTAGTTGATCTTGAATTGAGTGGAAACTTGCTTGAGGGCGAGATTCCAAGAGAAATTGCATCACTAAAGAACTTGCAACTGCTTGAACTGTACTATAATCGACTTACTGGAAACATACCGGAAGAGCTTGGAAATCTGACAGAGCTCATAGACTTGGACATGTCAGTCAACCAGTTGACAGGAAAGTTTCCTGATTCTATTTGTCGCCTCCCCAAGCTCAGAGTCCTGCAGTTCTACAACAACAGCGTCATAGGAAAGATTCCAAGAGCGATTGTCAATTTGACTACCCTGGTCATGCTATCCCTCTATGATAATTTCATCACAGGAGAAGTCCCACAAAATCTGGGGAACTCATCGACCATGATTCTTCTAGAATTGTCAGAGAATCATCTCTCTGGTCCATTACCAGCTTCTGTTTGCAGGGGAGGTAGGTTGCTCTACTTTCTAGTCCTACAAAATAAGTTTTCAGGAGAAATACCATTTAATTATGCAAAATGTGAGTCTCTACTGAAATTTCGTGTTAGTTCTAACCAATTAGAGGGATCAATACCTGAAGGTCTTCTAGGTCTCCCCCATCTTTCAATAATTGATGTTGCATACAATAGTTTGAGTGGTTCAGTATCAAATTCAATTCTAAATGCAAAAAACTTGTCACAATTGTTCATGCAGAACAATAGGATTTCAGGTGTTTTACCCCCTGGAATCTCGAGAGCAACTAATTTGGTGAAAATAGATCTCAGTAACAATCTTCTTTCTGGTCCAATACCTTCTGAAATTGGAAATTTAAAGAAGATAAATTTGCTACTGTTGCAAGGCAACAAGTTGAATTCCTCAATCCCCAAGTCGCTCTCTTCATTAAAATCCCTCAATGTTCTTGATCTTTCCAACAATCTCCTGACAGGAAATATTCCAGAAAGCCTTTCTGAATTGTTACCTAACTCCATTAACTTTTCAAACAACAAGCTTTGTGGTCCAATACCTCTCTCTTTGATTAAAGGGGGTTTAGTAGAAAGCTTTTCAGGTAACCCAGAGCTTTGCGTCTCAGTCTATCTAGAGTCATCAGGACAAAACTTCCCCATATGTTCACAAACTTACAGCCGAAAGAGGCTTAGTTTCATATGGGCGATTGTAGTTTCAATTGTAGTAACCTTCATTGGAGCTGCCCTGTTTCTAAAACATTGGTTCAGCAAGAAAAGAGAAATGATGGAACGTGATGAAACACTGTCATCATCTTTTTTCTCATACGAGGTCAAGAGCTTCCATCGAATAACTTTTGACCAACGTGAGATATTCGAAGCCATGGTTGACAAGAACATTGTGGGGCACGGTGGATCTGGGACAGTGTATAAGATTGAATTGAGCACTGGGGATGTAATTGCAGTAAAAAAGCTATGGAGTCGAAAGACAAAAGATTTGGCTTTTGATGATCAGCTAGACAAGGAGTTAAAAACTGAGGTGGAGACTCTTGGAAATATAAGGCATAAAAACATTGTCAAACTGTACAGTTACATCTCATGTTTGAATTGCAACCTATTGGTTTACGAGTACATGACAAACGGTAACCTTTGGGATGCCCTCCATAAAGGGTGGATCCATCTGGATTGGTGTACTCGGCATCAAATTGCACTTGGACTATCAGAGGGTTTAGCTTACCTCCACCATGATCTGATGCCCCCTATCATTCACAGAGACATTAAGACCTCGAATATCCTACTCGACACAAATTACCAGTCAAAGGTTGCAGATTTTGGCATAGCCAAAGTTTTGCAAGCTAGGGAAGGTAAGGACTCAACCACTACAATTGTTGCCGGAACTTATGGCTATATAGCGCCTGAGTATGCATATTCCTCCAAAGCAACAACTAAGTGTGACGTCTACAGTTTTGGAGTTGTACTGATGGAATTAGTCACTGGAAAGAAGCCAGTAGAGGCAGAGTTCGGGGACAACAAAAATATCATTTGCTGGGTTGCTAGCAAAGTGAATACCCAAGAAGGAACTATCGAAGTTTTAGACAAGCGGATACCAGGGTCATTATTCGAGGAGATGATTCAGGTTCTTCGAATCGCTATCCTCTGCACTTACAAAAATCCAGTGCTTCGCCCAACAATGAGAGAGGTGGTTCAATTGCTAACTGAGGCAGCTCCTCGCAAATTAGATTCTTGCACGATACCAAATAATAACAAAAATATGCCAGATGCTACTAAGATGAGACATCTCGGCTCAACTCAATGTTCAGTACCTACAATGCAGTTTGTTTTTCCTCAATACGTTGCAACTGAACTGGATAGGATTGAGCTTTTGATCTTTCTAATGGAGACCAGAATCGGCCCGGCACCGGAGAACTGGACCGGTACCGGTCAACTGGTACCAGAATTGGTCCATATATATGGAGCACCGGACCGAGTCCGGTCCACGGCCGGTATTCAGGTCGGAAATGCTTGCTGGGAGCTGTACTGCCTCGAGCACGGGATTCAGCCCGATGGCCAAATGCCAAGTGACAAAACAGTAGGCGGAGGGGACGATGCCTTTAACACTTTTTTCAGTGAAACCGGAGCAGGGAAGCATGTGCCTCGTGCCATTTTTGTAGATCTTGAACCCACTGTCATCGATGAAGTGAGGACTGGATCATACCGCCAACTCTTTCATCCTGAACAACTCATCAGCGGCAAGGAAGATGCTGCCAACAACTTCGCCCGTGGACATTATACTATTGGGAAAGAAATTGTTGATCTCTGCTTGGATCGGATCAGAAAGCTTGCCGACAATTGCACTGGTCTCCAGGGTTTCTTGGTTTTCAATGCAGTCGGTGGTGGTACTGGATCGGGACTTGGTTCACTTCTCCTGGAGCGACTTTCTGTTGATTATGGCAAAAAATCGAAGCTTGGGTTCACCGTCTATCCTTCACCTCAGGTTTCTACTTCTGTTGTAGAACCCTACAATAGCGTCCTGTCAACCCACTCTCTTCTTGAGCATACAGATGTCGCTGTGCTTCTTGACAATGAAGCCATCTATGACATTTGTAGGCGCTCCCTTGACATTGAACGCCCCACTTACACCAATCTCAATCGTCTGGTCTCACAGGTGATTTCATCCCTTACTGCTTCATTAAGGTTCGATGGTGCCCTCAATGTTGATGTTACTGAGTTCCAGACCAACTTGGTCCCCTACCCTAGGATCCATTTCATGCTTTCCTCTTACGCCCCTGTCATCTCTGCTGAGAAGGCATACCATGAGCAGCTATCTGTTGCCGAAATTACTAACAGCGCTTTTGAACCTGCTTCGATGATGGCCAAATGTGACCCACGCCATGGTAAGTACATGGCATGCTGCTTGATGTACCGAGGTGATGTTGTCCCCAAGGATGTTAATGCAGCAGTGGCCACCATTAAAACCAAGCGAACCATCCAGTTTGTAGATTGGTGTCCTACTGGATTCAAGTGTGGTATCAATTACCAGCCACCCACTGTAGTACCAGGCGGTGACCTTGCAAGGGTGCAGAGAGCTGTGTGCATGATCTCCAACTCAACCAGTGTTGCAGAAGTATTCTCCCGCATTGACGTCAAGTTTGATTTTATGTATGCCAAGCGTGCTTTTGTGCACTGGTACGTTGGTGAGGGGATGGAGGAAGGAGAGTTCTCAGAGGCTCGGGAGGATCTTGCTGCTCTTGAGAAGGATTATGAGGAGGTTGGTCTAGAGTCTCCTGATGGGGACGAAGGCGAGGATCCAGAGGACTACTGA 4374 43.96 MTENFEIPDVADGEKVDHGIIGRSCQSQFFDIMRKTASGKLLTDWDISGGKHFCNFSGISCNEQGYVHGIDVSSSSLHGIFPADVCSYLPELRVLRLTRSGLWGSFPPGITNCSLLEELEMSFLYLSGKIPDFSLMKSLRMLDLSYNHFTGEFPMSIFSLHNLEKVNFNEVNTLNPWQLPENISKLIKLETMILTSCKLHGKIPRSIGNLTSLVDLELSGNLLEGEIPREIASLKNLQLLELYYNRLTGNIPEELGNLTELIDLDMSVNQLTGKFPDSICRLPKLRVLQFYNNSVIGKIPRAIVNLTTLVMLSLYDNFITGEVPQNLGNSSTMILLELSENHLSGPLPASVCRGGRLLYFLVLQNKFSGEIPFNYAKCESLLKFRVSSNQLEGSIPEGLLGLPHLSIIDVAYNSLSGSVSNSILNAKNLSQLFMQNNRISGVLPPGISRATNLVKIDLSNNLLSGPIPSEIGNLKKINLLLLQGNKLNSSIPKSLSSLKSLNVLDLSNNLLTGNIPESLSELLPNSINFSNNKLCGPIPLSLIKGGLVESFSGNPELCVSVYLESSGQNFPICSQTYSRKRLSFIWAIVVSIVVTFIGAALFLKHWFSKKREMMERDETLSSSFFSYEVKSFHRITFDQREIFEAMVDKNIVGHGGSGTVYKIELSTGDVIAVKKLWSRKTKDLAFDDQLDKELKTEVETLGNIRHKNIVKLYSYISCLNCNLLVYEYMTNGNLWDALHKGWIHLDWCTRHQIALGLSEGLAYLHHDLMPPIIHRDIKTSNILLDTNYQSKVADFGIAKVLQAREGKDSTTTIVAGTYGYIAPEYAYSSKATTKCDVYSFGVVLMELVTGKKPVEAEFGDNKNIICWVASKVNTQEGTIEVLDKRIPGSLFEEMIQVLRIAILCTYKNPVLRPTMREVVQLLTEAAPRKLDSCTIPNNNKNMPDATKMRHLGSTQCSVPTMQFVFPQYVATELDRIELLIFLMETRIGPAPENWTGTGQLVPELVHIYGAPDRVRSTAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNSTSVAEVFSRIDVKFDFMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLESPDGDEGEDPEDY 1457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 598165 613301 - BLOR15901 Blo17g00080 72468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00080 1457 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 24 947 - -
Blo17g00080 1457 SUPERFAMILY Protein kinase-like (PK-like) 634 922 IPR011009 -
Blo17g00080 1457 Pfam Protein kinase domain 648 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00080 1457 Gene3D - 1275 1389 IPR037103 -
Blo17g00080 1457 ProSitePatterns Protein kinases ATP-binding region signature. 652 675 IPR017441 GO:0005524
Blo17g00080 1457 Gene3D Helix hairpin bin 1390 1442 IPR023123 -
Blo17g00080 1457 Gene3D Tubulin/FtsZ, GTPase domain 1016 1274 IPR036525 -
Blo17g00080 1457 Gene3D Phosphorylase Kinase; domain 1 628 728 - -
Blo17g00080 1457 SMART Tubulin_4 1055 1252 IPR003008 GO:0005525
Blo17g00080 1457 SMART LRR_typ_2 136 160 IPR003591 -
Blo17g00080 1457 SMART LRR_typ_2 210 233 IPR003591 -
Blo17g00080 1457 SMART LRR_typ_2 234 258 IPR003591 -
Blo17g00080 1457 SMART LRR_typ_2 498 522 IPR003591 -
Blo17g00080 1457 SMART LRR_typ_2 89 113 IPR003591 -
Blo17g00080 1457 ProSiteProfiles Leucine-rich repeat profile. 500 523 IPR001611 GO:0005515
Blo17g00080 1457 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 24 947 - -
Blo17g00080 1457 SMART LRR_sd22_2 450 476 - -
Blo17g00080 1457 SMART LRR_sd22_2 234 260 - -
Blo17g00080 1457 SMART LRR_sd22_2 498 521 - -
Blo17g00080 1457 SMART LRR_sd22_2 210 233 - -
Blo17g00080 1457 SMART LRR_sd22_2 306 329 - -
Blo17g00080 1457 SMART serkin_6 646 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00080 1457 SUPERFAMILY L domain-like 251 561 - -
Blo17g00080 1457 CDD alpha_tubulin 1018 1441 - -
Blo17g00080 1457 SMART Tubulin_C_4 1254 1399 IPR018316 -
Blo17g00080 1457 Coils Coil 1424 1444 - -
Blo17g00080 1457 Pfam Tubulin/FtsZ family, GTPase domain 1018 1219 IPR003008 GO:0005525
Blo17g00080 1457 PRINTS Tubulin signature 1184 1197 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1386 1414 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1016 1036 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1198 1218 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1140 1158 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1101 1112 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1159 1180 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1059 1078 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Tubulin signature 1114 1138 IPR000217 GO:0005874|GO:0007017
Blo17g00080 1457 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 1148 1154 IPR017975 GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 SUPERFAMILY Tubulin C-terminal domain-like 1252 1441 IPR008280 -
Blo17g00080 1457 ProSiteProfiles Protein kinase domain profile. 646 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00080 1457 Gene3D Ribonuclease Inhibitor 28 173 IPR032675 -
Blo17g00080 1457 SUPERFAMILY RNI-like 70 344 - -
Blo17g00080 1457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Blo17g00080 1457 Gene3D Transferase(Phosphotransferase) domain 1 729 942 - -
Blo17g00080 1457 Pfam Tubulin C-terminal domain 1269 1398 IPR018316 -
Blo17g00080 1457 Gene3D Ribonuclease Inhibitor 290 567 IPR032675 -
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1154 1166 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1094 1107 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1428 1444 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1353 1366 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1051 1064 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1280 1295 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1366 1385 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1391 1407 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1167 1178 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1126 1134 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1024 1039 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1220 1232 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 PRINTS Alpha-tubulin signature 1327 1348 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Blo17g00080 1457 SUPERFAMILY Tubulin nucleotide-binding domain-like 1018 1250 IPR036525 -
Blo17g00080 1457 Gene3D Ribonuclease Inhibitor 174 282 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00080 Blo18g00091 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00917 Blo-Chr2:35356766 Blo17g00080 Blo-Chr17:598165 0 dispersed
Blo03g00060 Blo-Chr3:2213716 Blo17g00080 Blo-Chr17:598165 0 dispersed
Blo08g00152 Blo-Chr8:1585265 Blo17g00080 Blo-Chr17:598165 0 dispersed
Blo14g00323 Blo-Chr14:3334979 Blo17g00080 Blo-Chr17:598165 0 dispersed
Blo17g00080 Blo-Chr17:598165 Blo18g00170 Blo-Chr18:1634765 0 dispersed
Blo12g00744 Blo-Chr12:25789459 Blo17g00080 Blo-Chr17:598165 0 wgd
Blo17g00080 Blo-Chr17:598165 Blo18g00091 Blo-Chr18:755381 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84778 PF00069 Pkinase 1.50E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00080 - - fve:101305947 1301.19