Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00138 ATGGATTTTGCAATGGATTTCTACGACTATGGAGGAGCTCAGTCAAACCCTTTTGGGTGTGAGCTAATGGAAGCACTTGAACCTTTTATGAAGAGTGCTTCTTCTTCAACCTCTGAAACTTCTTCTTTTCCTTCTTCTCTCTCCTATTTTCCTCCCAGCCAAACATACCCAGATGGGTCGTCTTCTTCCTTCGCTCAATCATTTACAGAGCCCTACTTAACCCAAAACCAATATCAAAACAACCTTTGTTTTGAGCAGCCATATTCGAACGAGCTCAACTACCATGCCCATTTTCAAACCCACCAGGATCAAAACCAAACCGAGAAACCTTGGGGAACGATTGATTATAACCAGCCAGAAACAACTCAGACCACTTCTCTCGATTCCAAGCCGACCAAGCTTTACAGAGGAGTGAGACAGAGGCATTGGGGAAAATGGGTGGCCGAGATTCGTCTGCCTAAGAATCGGACTCGGCTGTGGCTCGGCACCTTCGACACAGCGGACGAAGCAGCAATGGCGTATGATAGGGCAGCTTATAAGCTCAGAGGTGACTCCGCTAGGCTCAATTTCCCACACCTTAAACACCATAGCTCGACTCTGGAGTTCGGCGACCTTAGCAGTCTCCATTCCTCGGTAGATGCGAAGCTCCAAGCAATTTATCAGAGCTTGGCCGATTCGCAAAAACAGGGGAAAAAGGAGAAAGCCGTTACCTCGAGAGGAAAAGCCAGGTCCCAGCCGGCGATAACTGGCGCAGAGAGTACAAAAATGACGGAAATGGAATCAAATGATTACGACCATTATTACTCCATGGACAATGCTTCCGGAAGGTTTGAAGCTCCGTCATTTTCAGACCTTACGTTCTCAGGTCTTGCAAACTCACCATGGGATCCATCTTCAGAGAATTTCCCGATGGAGAACAACTACCCATCAGAGATTAACTGGGATTCCATCTTCCCTTGA 960 47.19 MDFAMDFYDYGGAQSNPFGCELMEALEPFMKSASSSTSETSSFPSSLSYFPPSQTYPDGSSSSFAQSFTEPYLTQNQYQNNLCFEQPYSNELNYHAHFQTHQDQNQTEKPWGTIDYNQPETTQTTSLDSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTADEAAMAYDRAAYKLRGDSARLNFPHLKHHSSTLEFGDLSSLHSSVDAKLQAIYQSLADSQKQGKKEKAVTSRGKARSQPAITGAESTKMTEMESNDYDHYYSMDNASGRFEAPSFSDLTFSGLANSPWDPSSENFPMENNYPSEINWDSIFP 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1285485 1286444 - BLOR08626 Blo18g00138 73442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00138 319 SMART rav1_2 134 197 IPR001471 GO:0003700|GO:0006355
Blo18g00138 319 CDD AP2 133 193 IPR001471 GO:0003700|GO:0006355
Blo18g00138 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 317 - -
Blo18g00138 319 ProSiteProfiles AP2/ERF domain profile. 134 191 IPR001471 GO:0003700|GO:0006355
Blo18g00138 319 MobiDBLite consensus disorder prediction 227 252 - -
Blo18g00138 319 Gene3D AP2/ERF domain 134 192 IPR036955 GO:0003700|GO:0006355
Blo18g00138 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 317 - -
Blo18g00138 319 SUPERFAMILY DNA-binding domain 134 192 IPR016177 GO:0003677
Blo18g00138 319 MobiDBLite consensus disorder prediction 100 129 - -
Blo18g00138 319 Pfam AP2 domain 135 183 IPR001471 GO:0003700|GO:0006355
Blo18g00138 319 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Blo18g00138 319 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00700 Blo18g00138 CCT
Blo17g00125 Blo18g00138 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00245 Blo-Chr3:5276579 Blo18g00138 Blo-Chr18:1285485 1.66E-40 dispersed
Blo04g00688 Blo-Chr4:6259647 Blo18g00138 Blo-Chr18:1285485 7.77E-33 dispersed
Blo13g00374 Blo-Chr13:21625464 Blo18g00138 Blo-Chr18:1285485 2.86E-32 dispersed
Blo18g00138 Blo-Chr18:1285485 Blo18g00657 Blo-Chr18:12325563 2.53E-24 dispersed
Blo04g00224 Blo-Chr4:1729127 Blo18g00138 Blo-Chr18:1285485 2.04E-22 transposed
Blo04g00941 Blo-Chr4:11344110 Blo18g00138 Blo-Chr18:1285485 1.59E-53 transposed
Blo11g00041 Blo-Chr11:335156 Blo18g00138 Blo-Chr18:1285485 1.44E-75 wgd
Blo12g00700 Blo-Chr12:25285115 Blo18g00138 Blo-Chr18:1285485 7.68E-77 wgd
Blo17g00125 Blo-Chr17:1158138 Blo18g00138 Blo-Chr18:1285485 2.18E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13567 PF00847 AP2 2.60E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00138 K09286 - csv:101214560 241.891