Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00229 ATGGACTTGAGCGTCATTCCGTTTAATCAGACACTCAAGCCGGAGAACGAACTCGACGAAGACGGCGACATCGTCGAGCCTAGGCACCCTTGCGAGCCCGCTGTGGTGATGAACCCCAGGAAGAAATTGACGTCTCAGTTGAGTTTCAGGTACGGAGAGTGCATGCGGAACCACGCGGCGTCCATTGGCGGACACGCAAGTGATGGTTGTGGCGAGTTCATGCCTCGTAGTGGTGACTCGCTCACTTGTGCTGCTTGTGGATGTCACCGCAACTTTCATCGGAGAGAATTTCCTGGTGGTGACCAGCTGCAGCATCACTATCCAGTGCACTCTCCCCATCCGTTGTTGCTGTACGCCGCCGGCCACGCAAAGAGCCCAATTATCGGGAACCACGTCGGCCTGTCTCAGCATTTTCGTAACGGAGGCGGGCGGCCAATGGGAAGCGGCGATCTGAGAGATCAGTACCAAGAGATGAACGACTACGACCGAAGGTCGGAGACACCGGACGAGAGAGGGGAAGTGCATATGGGATCCACGCCGAGAGGGAAGAGATTCAGGACCAAGTTCACGCAGGAGCAGAAAGACAGAATGCTGGCGTTCGCAGAGAGCATCGGGTGGAGGATGCAGAGGAGCGACGACGTGGCGCTTAACCAGTTCTGCGCAGACGTTGGGGTGAAGCGCAACGTCCTCAAAGTCTGGATGCACAATAATAAAAGCGCCCATAGCCGTCGAGAACCACAACCCACGACACAAAGCCAGTCTCCGTCGCCACCTCATCCTCCTCCACCGGTGGAGCTCATTGGAGCTTAA 810 56.54 MDLSVIPFNQTLKPENELDEDGDIVEPRHPCEPAVVMNPRKKLTSQLSFRYGECMRNHAASIGGHASDGCGEFMPRSGDSLTCAACGCHRNFHRREFPGGDQLQHHYPVHSPHPLLLYAAGHAKSPIIGNHVGLSQHFRNGGGRPMGSGDLRDQYQEMNDYDRRSETPDERGEVHMGSTPRGKRFRTKFTQEQKDRMLAFAESIGWRMQRSDDVALNQFCADVGVKRNVLKVWMHNNKSAHSRREPQPTTQSQSPSPPHPPPPVELIGA 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2257098 2257907 - BLOR08717 Blo18g00229 73533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00229 269 MobiDBLite consensus disorder prediction 237 269 - -
Blo18g00229 269 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 6 39 248 - -
Blo18g00229 269 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 51 96 IPR006456 -
Blo18g00229 269 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 50 96 IPR006456 -
Blo18g00229 269 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 183 238 IPR006455 -
Blo18g00229 269 MobiDBLite consensus disorder prediction 160 181 - -
Blo18g00229 269 Pfam ZF-HD protein dimerisation region 49 96 IPR006456 -
Blo18g00229 269 MobiDBLite consensus disorder prediction 251 269 - -
Blo18g00229 269 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 39 248 - -
Blo18g00229 269 Gene3D - 168 243 - -
Blo18g00229 269 SUPERFAMILY Homeodomain-like 173 243 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01603 Blo18g00229 CCT
Blo12g01115 Blo18g00229 CCT
Blo01g01603 Blo18g00229 ECH
Blo12g01115 Blo18g00229 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00796 Blo-Chr17:25617141 Blo18g00229 Blo-Chr18:2257098 1.19E-43 dispersed
Blo18g00229 Blo-Chr18:2257098 Blo18g00811 Blo-Chr18:23935729 1.38E-45 dispersed
Blo17g00244 Blo-Chr17:2439156 Blo18g00229 Blo-Chr18:2257098 2.33E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13576 PF04770 ZF-HD_dimer 3.90E-25 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00229 - - zju:107405038 266.929