Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo18g00706 ATGGCGGAAAGACATAATGCGGTTTCTCAGCAGCAGTATCCTGCATTTCTTCTGGACACTCTGTATTGCTCCGAAGAGAAATTAGAAGGCGGAGATGGAGGTAAAGAAGCAGAAAACATGGTCGATTATGGGTATAAGATTCAGACCCCTCTTACTCTTTTAGAGCAGGATTGTTTGTGGGCTGATGATGAGCTCGTCTCTTTACTCTCGAAGGAGCTGCCCAATGAACTCCATAATTCCTTGCTGACCAACCCACCTTTGGTTGCGGCTCGGAGAGAGGCCGTGGAGTGGATGCTGAAGGTCAATGCGCGGTTCTCCTTCTCAGCCCTCACTGCAGTTCTCGCCGTTGATTATTTCGACAGATTTATGTCCAAATTCTACCAGCTGAGGGAGAGGCCATGGATGACCCAGCTTGTTGCTGTGGCTTGTATCTCTCTGGCTGCGAAGGTAGAAGAGACTCAAGTTCCTCTTCTACTAGACCTGCAAGCGGAGGGGAGCAGGTTTGTGTTCGAAGCCAAGACGATTAAGAGAATGGAGATTCTCGTGCTCTCCACACTTCAATGGCGGATGAATCCTGTAACCCCACCTTCATTTTTGGATTATTTTACGAGAAGACTTGGGTTGAAAGCCTATCTTTGTTGCGAATTTCTCAGGAGATGCGAGCGAACTCTTATCTCTGCCATTTTAGATTCAAGGCTTACGTCTTATCTTCCATCTGTTATAGCCACTGCTACAATGCTTTACGTTGTCAATTGTATTGAACCATGTGTTGGGCTGCAATTTCAAAAACAGCTTCTGGGTATTGTTGGAGTCGATAAGGACAAGGTAGATAGTTGTTATACTCTTCTTTTGGAAGCATTCGAGGGAGATGAAGAAAAATCGAACAAACGCAAATTCCGATCATATCCAGGCAGTCCCAATGGAGTAATGGATTTATCTCTCAGGTCCGATTATTCAAGCGATTCATGGTCTGTACCATGCTCTGTTTCATCCTCACCAGAGCCTTTGTCCAAGAAACTCAGGCCCCAGGACCCAACGCCCAATACGAATTTTCTCAGCATTCCACGCTAG 1071 46.13 MAERHNAVSQQQYPAFLLDTLYCSEEKLEGGDGGKEAENMVDYGYKIQTPLTLLEQDCLWADDELVSLLSKELPNELHNSLLTNPPLVAARREAVEWMLKVNARFSFSALTAVLAVDYFDRFMSKFYQLRERPWMTQLVAVACISLAAKVEETQVPLLLDLQAEGSRFVFEAKTIKRMEILVLSTLQWRMNPVTPPSFLDYFTRRLGLKAYLCCEFLRRCERTLISAILDSRLTSYLPSVIATATMLYVVNCIEPCVGLQFQKQLLGIVGVDKDKVDSCYTLLLEAFEGDEEKSNKRKFRSYPGSPNGVMDLSLRSDYSSDSWSVPCSVSSSPEPLSKKLRPQDPTPNTNFLSIPR 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 16177412 16178783 + BLOR09194 Blo18g00706 74010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo18g00706 356 PANTHER CYCLIN D3.1 PROTEIN 47 339 - -
Blo18g00706 356 PANTHER CYCLINS 47 339 IPR039361 -
Blo18g00706 356 SMART Cyclin_C_2 193 335 IPR004367 -
Blo18g00706 356 Pfam Cyclin, N-terminal domain 89 191 IPR006671 -
Blo18g00706 356 MobiDBLite consensus disorder prediction 318 356 - -
Blo18g00706 356 SUPERFAMILY Cyclin-like 59 191 IPR036915 -
Blo18g00706 356 Pfam Cyclin, C-terminal domain 193 302 IPR004367 -
Blo18g00706 356 ProSitePatterns Cyclins signature. 91 122 IPR006671 -
Blo18g00706 356 SUPERFAMILY Cyclin-like 176 288 IPR036915 -
Blo18g00706 356 Gene3D - 89 191 - -
Blo18g00706 356 Gene3D - 192 281 - -
Blo18g00706 356 CDD CYCLIN 91 183 IPR013763 -
Blo18g00706 356 SMART cyclin_7 96 184 IPR013763 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00970 Blo18g00706 CCT
Blo01g01517 Blo18g00706 CCT
Blo12g00970 Blo18g00706 ECH
Blo01g01517 Blo18g00706 ECH
Blo17g00869 Blo18g00706 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01517 Blo-Chr1:54732096 Blo18g00706 Blo-Chr18:16177412 9.09E-115 dispersed
Blo04g01071 Blo-Chr4:15393536 Blo18g00706 Blo-Chr18:16177412 7.03E-90 dispersed
Blo04g01267 Blo-Chr4:26093449 Blo18g00706 Blo-Chr18:16177412 6.71E-95 dispersed
Blo16g00407 Blo-Chr16:15303077 Blo18g00706 Blo-Chr18:16177412 3.58E-84 dispersed
Blo18g00706 Blo-Chr18:16177412 Blo11g00015 Blo-Chr11:137462 5.90E-44 dispersed
Blo12g00970 Blo-Chr12:27787416 Blo18g00706 Blo-Chr18:16177412 1.06E-120 wgd
Blo17g00869 Blo-Chr17:28497262 Blo18g00706 Blo-Chr18:16177412 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo18g00706 K14505 - pvy:116125632 395.586