Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00138 ATGGATTTAGGGGGGAAGGACGATTATGAACTAGAAAACAGGACTGAGAATTCTGTCAACTGTTCTCCAAGTATGTCCTCTGGCTGGCGATTTGGTGGAGCCCAGCTCTTGAAAACGTCAATGGGATTGGTTAACCCCGCAAATTCCTCTGGGAAAGAGGGTCTAATTTTTCCTTCATGTTCATCGGCTTCGATGGTGGATTCTTTTGGTCCAAACTTCAATGGTGGATTTTTTGATCTCTACAGTAACGTTAGTTCTTCAAACCTTGTTGGAATTAGCAGAGATGGTGCAGGTTCAATGAGAAAAACTTCTGATAGAAGTCTTGATATGAGTTGGAACCCACCAAATCAAACGAGAGGAAGTAATTTACCCGGTTTTGCTCACCCGAGCTTACCTCAATTTCCGGCTGATTCTGCATTCATCGAGCGGGCAGCTAGATTATCCTGCTTCAATGGTGGGAATCTTATGGAAATAGCTAGTCCTTTCGGTATTCCTCAATCCATGCCTCTTTATTCTTGGAGTTCGGGGACGAATCCGAGCAATCAAGAAATTAACTCCATTGATGGGATGAGATTAGCTACTGCGGGGCAACCTCAAAAACAAGAGATTAGTGATATAGGAGAAGCCTCCATGGATGTTTGTTTGGAGCATGGATCTGAGAATCCTGAGAATGATGGAAAAAATGAGAACCTTCTCAGATCTCACAATGAAGAAAAACGCACTATCAGCGGGTCAGGCAGTGAATCGGAAGACGAGATGAGTGGTGGTGCTCAAGATGAGCCGTCGACGGCGGTGGGTAGAGAAGAAGAACCTTCCGGCAAGGGAATCGGACCCAAAAAAAGGAAGAGGGTTAGGCAGAACACTGGACTTGATCAAGCCAAAGATGGCGAATCTGCCAACGATGATAAGGAGATTGAACAGAAGGACGATCAAAACCCATATCCAGTTGCCCACAAATCTACTGGAAAACACAGTAAACAAGGATCTCAACCATCCGATGTTAGAAGGGAGAAGATCAGTGAAAGGATGAAGTTTCTTCAAGATCTTGTTCCGGGTTGCAGCAAGGTCACCGGCAAGGCGGTGATGCTAGACGAAATAATAAATTACGTCCAGTCGCTCCAACGACAAGTAGAATTTTTATCGATGAAACTCGCCACTGTCAATCCGAGGATGGATTTCAATATTGATGGGCTTGCCAAAGATATTCTTCAAGCAAGGGCTGGTTCATCATCTTCATTGGGCTATTCTCCAGACATATCTATGGCTTATCCTCCATTACAACCCTCCCTACCAAATGTGTGGGAGGTGGATGAGCTGCACCATGTTTTCCAAATGAGCTATGCAGCTGCTGCTGCTTCGAATAGCCAAAGTGTTGATGGTAAATTCTCTAATTAG 1395 44.66 MDLGGKDDYELENRTENSVNCSPSMSSGWRFGGAQLLKTSMGLVNPANSSGKEGLIFPSCSSASMVDSFGPNFNGGFFDLYSNVSSSNLVGISRDGAGSMRKTSDRSLDMSWNPPNQTRGSNLPGFAHPSLPQFPADSAFIERAARLSCFNGGNLMEIASPFGIPQSMPLYSWSSGTNPSNQEINSIDGMRLATAGQPQKQEISDIGEASMDVCLEHGSENPENDGKNENLLRSHNEEKRTISGSGSESEDEMSGGAQDEPSTAVGREEEPSGKGIGPKKRKRVRQNTGLDQAKDGESANDDKEIEQKDDQNPYPVAHKSTGKHSKQGSQPSDVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNIDGLAKDILQARAGSSSSLGYSPDISMAYPPLQPSLPNVWEVDELHHVFQMSYAAAAASNSQSVDGKFSN 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1326386 1328504 - Bma000303.1 Bma01g00138 74655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00138 464 SMART finulus 334 379 IPR011598 GO:0046983
Bma01g00138 464 MobiDBLite consensus disorder prediction 216 335 - -
Bma01g00138 464 MobiDBLite consensus disorder prediction 104 123 - -
Bma01g00138 464 Gene3D - 333 392 IPR036638 GO:0046983
Bma01g00138 464 MobiDBLite consensus disorder prediction 218 246 - -
Bma01g00138 464 MobiDBLite consensus disorder prediction 263 277 - -
Bma01g00138 464 MobiDBLite consensus disorder prediction 1 24 - -
Bma01g00138 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 373 IPR011598 GO:0046983
Bma01g00138 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 335 392 IPR036638 GO:0046983
Bma01g00138 464 MobiDBLite consensus disorder prediction 284 313 - -
Bma01g00138 464 PANTHER TRANSCRIPTION FACTOR BHLH49 334 433 - -
Bma01g00138 464 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 334 433 IPR024097 GO:0006355
Bma01g00138 464 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 44 333 IPR024097 GO:0006355
Bma01g00138 464 MobiDBLite consensus disorder prediction 97 123 - -
Bma01g00138 464 PANTHER TRANSCRIPTION FACTOR BHLH49 44 333 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00138 Bma06g00747 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00138 Bma-Chr1:1326386 Bma06g01401 Bma-Chr6:50785189 6.30E-38 dispersed
Bma01g00138 Bma-Chr1:1326386 Bma06g00747 Bma-Chr6:38766134 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00138 - - zju:107429134 431.409