Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g00833 ATGTTGCGTAAGGAGAAGGAAGAAGAAGAATGGGTCAAGAAATGTAAGAAAATGAAATGGTTTTCTGGTTCGCTCTGTAATAACACGAAGGTAATGCAAAGGCCTGAAACTGGGTCGCCGGAGGTTTACAAGAAAAGGGCTTTAATGGCTTCCTCAAACAGCTACATTACCGATTCTTCTACCTCTACCAGGTCCATGAAGTCTACTGTTTACGAACAAAACGGCGTCATTTCAACGTCGTTTTCTTCGTCTTCTTCTTCTTCTGCAACTTCCATCGCCGCCTTCGGTGGGTCTTTCAGAGGAATACCTTTCGGAAAAATTTCTGGGTGTTACGAGTGTAAAATGGTGATCGACCCTGTTCTTGGATATACCAAAGATTCTTCTTTGAGATCAAGCATTTTTCCTTGTCCTCAATGTTGTGAGATTTTCACGAAACCTGAAATTCTGGAGCTTCATCTGGCCAATAACCATGCTGTATCTGAATTAGACGAAGAGGATACAAGCAAAAACATAGTGGAAATCATATTCAAATCAAGATGGATGAAGAAGGAACCTCAAATCTGCAAGATAGAACGAGTTCTAAAAGTCCACAACACCCAAAAAACCATTTCGAAATTCGAAGAGTACAGAGACGCCATTAAAGCCAAAGCAACCAAGCTCCAGAAGAAACACCCCCGATGCCTAGCGGACGGAAACGAGCTTCTCCGGTTCCACTGCACCACCTTAGCTTGCTCCCTAGGCGTCAATGGCTGCTTCACTCTATGCCACTCGATCCATCCTCAGTGCAGTATCTGCAGCATCATAAGGAGCGGCTTCAGGGCAGCCGAGATGGGAATTTTGACGATGGCAGCAAGTGGAGCAGCTCACGACAGGGCCGGGGAGGCGGTGGAAAGGAATGAGAAGAGGGCGATGGTGGTTTGCAGGGTGGTGGCCGGGAGGGTGAAGAAGAGCGGGGAAGGGAGCATGGAGGAGTATGACTCAGTGAGCGGAGGTGTGGGAGTTCATTCTAATTTGGACGAGTTGTATGTGTTTAATGCCAAGGCTATACTGCCTTGTTTTGTTGTTATCTATCAAGGGTAA 1080 46.3 MLRKEKEEEEWVKKCKKMKWFSGSLCNNTKVMQRPETGSPEVYKKRALMASSNSYITDSSTSTRSMKSTVYEQNGVISTSFSSSSSSSATSIAAFGGSFRGIPFGKISGCYECKMVIDPVLGYTKDSSLRSSIFPCPQCCEIFTKPEILELHLANNHAVSELDEEDTSKNIVEIIFKSRWMKKEPQICKIERVLKVHNTQKTISKFEEYRDAIKAKATKLQKKHPRCLADGNELLRFHCTTLACSLGVNGCFTLCHSIHPQCSICSIIRSGFRAAEMGILTMAASGAAHDRAGEAVERNEKRAMVVCRVVAGRVKKSGEGSMEEYDSVSGGVGVHSNLDELYVFNAKAILPCFVVIYQG 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7839060 7840250 - Bma001053.1 Bma01g00833 75350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g00833 359 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 14 358 - -
Bma01g00833 359 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 14 358 - -
Bma01g00833 359 ProSitePatterns Zinc finger C2H2 type domain signature. 136 157 IPR013087 -
Bma01g00833 359 Gene3D - 157 358 - -
Bma01g00833 359 SUPERFAMILY ADP-ribosylation 159 358 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02640 Bma01g00833 CCT
Bma01g00833 Bma02g00231 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00833 Bma-Chr1:7839060 Bma02g00231 Bma-Chr2:2421948 1.32E-175 dispersed
Bma14g00038 Bma-Chr14:500946 Bma01g00833 Bma-Chr1:7839060 2.34E-34 dispersed
Bma01g00833 Bma-Chr1:7839060 Bma01g00835 Bma-Chr1:7883422 0 proximal
Bma01g00833 Bma-Chr1:7839060 Bma01g02640 Bma-Chr1:83911540 1.26E-141 wgd
Bma01g00833 Bma-Chr1:7839060 Bma02g00228 Bma-Chr2:2396807 2.77E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g00833 - - qlo:115960248 468.388