Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02363 ATGGAAGTTGAACGAAGACAGGAAAAACATCCGACTTCAATGAAATCAAGATTCAGACGTGTCTGTGTTTTCTGTGGTAGCAGCCCTGGAAAGAACCCCAGCTACCAAGTTGCAGCCATTCAACTTGGCAAACAACTGGTGGAGAGGAAGATAGACTTGGTCTATGGAGGAGGGAGCATTGGTCTAATGGGTTTTGTCTCTCAAGCTGTCTACGATGGAGGCCGCCACGTATTAGGAGTGATTCCGAGGTCTCTCATGCACAGAGAAATCACCGGAGAAAGCATAGGAGAAGTGAGGCCAGTATCAGGAATGCACCAGAGGAAAGCCGAGATGGCCCGTCAAGCTGACGCCTTTATAGCACTGCCAGGTGGATACGGCACTCTAGAAGAACTCTTGGAAGTTCTAACCTGGGCTCAACTGGGAATCCATGAAAAACCAGTGGGGCTATTGAACGTTGATGGATACTACAACTCACTTCTGTCCTTCCTAGACAAAGCTGTCGAAGAAGGATTTATAACCCCAGCTGCCCGAAACATCACTGTCTCTGCCCAAACTGCCCATGAACTCATCTCCAAACTCGAGGGATATGTTCCAAAGCATCCTCCGGCGGCCACTACGGTGCGGTGGGAGATGGAGCAGCATATGGATTATGCGGCAAAGTCAGACATTGCTCGTTGA 678 49.41 MEVERRQEKHPTSMKSRFRRVCVFCGSSPGKNPSYQVAAIQLGKQLVERKIDLVYGGGSIGLMGFVSQAVYDGGRHVLGVIPRSLMHREITGESIGEVRPVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVLTWAQLGIHEKPVGLLNVDGYYNSLLSFLDKAVEEGFITPAARNITVSAQTAHELISKLEGYVPKHPPAATTVRWEMEQHMDYAAKSDIAR 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81321365 81322689 + Bma003234.1 Bma01g02363 76880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02363 225 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 10 216 - -
Bma01g02363 225 Pfam Possible lysine decarboxylase 63 192 IPR031100 -
Bma01g02363 225 Gene3D - 8 195 - -
Bma01g02363 225 PANTHER LOG FAMILY PROTEIN YJL055W 10 216 - -
Bma01g02363 225 SUPERFAMILY MCP/YpsA-like 17 196 - -
Bma01g02363 225 TIGRFAM TIGR00730: TIGR00730 family protein 20 196 IPR005269 GO:0009691|GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02363 Bma01g00729 CCT
Bma01g02363 Bma04g00242 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02363 Bma-Chr1:81321365 Bma11g00179 Bma-Chr11:1610589 1.96E-115 dispersed
Bma14g00309 Bma-Chr14:3860998 Bma01g02363 Bma-Chr1:81321365 1.20E-09 transposed
Bma01g00729 Bma-Chr1:6668243 Bma01g02363 Bma-Chr1:81321365 2.01E-132 wgd
Bma01g02363 Bma-Chr1:81321365 Bma04g00242 Bma-Chr4:2091144 4.93E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02363 K22522 - cit:102623540 369.007