Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02509 ATGGCGTCGGCGAATTCGATTAACTCGGATCCACCGCGACGCTCTTCGTCTTCTTCTTCCTCCGCTAGGAAAAGAAAAGCTCGATCTCATCAGAGCAAGCGGAAAGCCAATATTAATCAGAATCACAGCCATAATTTCGCCTCTATGACCTTTGATGGCCCCCTCCGCAATGTCCATGACTCCAATCCTGCTACTGACTCCACCTTCCTTGAAGCTCAGATAACCTCAGTGGATCCCTCTAACCTGAAAAACGCCTCTCCCGCCTTCAGTGGCAATCCTAATAATAGCTCCTCTATCGACCCCAAAACTTTGGATGATGTGTGGAGGGACATTGTATCCGGCACTTGCAAGGGGTTGAAGGAGGAGTGTCCTTACGATATGATGACGCTGGAGGATTTTCTGGCCAAAGCCGGGGCAGTGAACAGTGTCGAGCTGAAGGTGCCACCGTCCGAGAGATTCAGTGAGGGGAAGTTTGCGTTTGATCCCGTCCTGCCTAGTTCACTTCAATCTCTGGATAAAGTTGACGGGGCAATTGTTGCTTATGGAAACGGAATGGATGTGTTTGGCTGTGAAGGAAGTGGGAGATTAAAGAAAGTTAGGTCTCTTTTAGAGCCTTTAGATAAGGCTGCTCAGCAGCGGGAAAGAAGGATGATCAAAAACAGGGAGTCGGCAGCGAGGTCCAGGGAAAGGAAGCAGGCATATCAAGCTGAGTTGGAGTCTTTAGCAGTGAGACTAGAGGAGGAAAACGAACAGCTATTAAAGGAAAAGGTACTGCATTTATTGATGGAGAATATAATCCCGGTTGTTGAAAAGCGGAGGCCACCTCGTTTGCTTAGGAGAGTTCAATCCATGGAATGGTAG 861 48.43 MASANSINSDPPRRSSSSSSSARKRKARSHQSKRKANINQNHSHNFASMTFDGPLRNVHDSNPATDSTFLEAQITSVDPSNLKNASPAFSGNPNNSSSIDPKTLDDVWRDIVSGTCKGLKEECPYDMMTLEDFLAKAGAVNSVELKVPPSERFSEGKFAFDPVLPSSLQSLDKVDGAIVAYGNGMDVFGCEGSGRLKKVRSLLEPLDKAAQQRERRMIKNRESAARSRERKQAYQAELESLAVRLEEENEQLLKEKVLHLLMENIIPVVEKRRPPRLLRRVQSMEW 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82779991 82782049 - Bma003389.1 Bma01g02509 77026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02509 286 MobiDBLite consensus disorder prediction 19 37 - -
Bma01g02509 286 Coils Coil 224 255 - -
Bma01g02509 286 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 255 IPR004827 GO:0003700|GO:0006355
Bma01g02509 286 CDD bZIP_plant_BZIP46 212 263 - -
Bma01g02509 286 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 4 285 - -
Bma01g02509 286 MobiDBLite consensus disorder prediction 1 18 - -
Bma01g02509 286 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Bma01g02509 286 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 285 IPR043452 GO:0003700|GO:0045893
Bma01g02509 286 Pfam bZIP transcription factor 210 255 IPR004827 GO:0003700|GO:0006355
Bma01g02509 286 MobiDBLite consensus disorder prediction 1 64 - -
Bma01g02509 286 MobiDBLite consensus disorder prediction 81 102 - -
Bma01g02509 286 Gene3D - 210 263 - -
Bma01g02509 286 SMART brlzneu 208 266 IPR004827 GO:0003700|GO:0006355
Bma01g02509 286 SUPERFAMILY Leucine zipper domain 212 255 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02509 Bma04g00371 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02509 Bma-Chr1:82779991 Bma03g00023 Bma-Chr3:270350 3.02E-12 dispersed
Bma04g01706 Bma-Chr4:53280979 Bma01g02509 Bma-Chr1:82779991 2.72E-44 transposed
Bma01g02509 Bma-Chr1:82779991 Bma04g00371 Bma-Chr4:2978451 1.86E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56815 PF00170 bZIP_1 3.00E-13 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02509 K14432 - zju:107421670 296.589