Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00487 ATGGGAAAGAAGGCTGTATTGATCGGATGCAATTATTCGGGAACTAAGGCTGAGCTCAAAGGCTGCATCAATGATGTTAAGAGGATGTACCAGTGTCTCATCGATCGCTACGGTTTCTCCGAAGACGACGTCACAGTCCTCATCGACACCGACGATTCTTACACTCAGCCCACTGGAAAGAACATTCGTGCTGCCTTAGCGCATCTGGTCGGATCGGCGGAGGCTGGGGATGTTCTCTTTGTTCACTACAGCGGACATGGGACTCGTCTTCCGGCCGAGACCGGGGAGGAAGACGATACTGGCTACGATGAGTGTATCGTCCCTTGTGATATGAACCTCATCACTGATGAGGATTTTAAGGAGTTAGTAGAGAAAGTACCAGAGGATTGCCGTCTCATCATCGTCTCAGATTCTTGCCACAGTGGTGGTCTCATTCAAAATACCAAAGAACAGATAGGCGAGAGCACTAAGCGTCTTGACGAGGAGGAAGAAGAACCATCCTCGCATTTTGGATTCAGGAGCTTTCTGCATCAGACTGCCCAAAGTGCTTTAGAGTCCCGTGGTATACAGCTTCCATCTGCACTGCGTCATGTTCATCGCCATCATAATCCCGATGAAGAAGAATCAGCCCGAGAGGTTGACATTGGATATGAAGGGGGAGGCTATGTCAAAAATAGGTCACTTCCTCTCTCCACTCTCATTGAGATCCTGAAGCAGAAAACAGGGAAAGACGACATAGATGTGGGGAAGCTACGACCAAGCCTGTTCGATATATTTGGGGAGGATTCCAGCCCCAAGGTGAAGAAATTCATGAAGGTCATCATGACTAAACTCCAACATGGTGAAGGGGAAAACGAAGGTGGTGGTTCTAGTGGGATGTTTGGAATGATTGGCAATTTGGCCCAGGAGTTCTTGAAGCAAAAGCTAGAAGAAAACAATGAAGACTATGCAAAACCTGCGATGGAAACTGATGTGGGGGGTAAAGAGGAGGTCTATGCAGGGGCAACAAAGCGTTCATTTCCTCATAATGGAATTCTGATCAGTGGATGCCAAACTGACCAAACTTCAGCGGATGCCAGCCCCTCTGGAAATTCAGCAAATGCTTACGGTGCTCTGAGCAATGCAATTCAGACCATACTTGAAGAATCAGATGGCTCAGTTACTTACCAGGAGCTGGTTTTGAAGGCCAGGGATAAACTGAAGGGCCAAGGCTTCACCCAGCGACCTGGTCTCTATTGCTCGGATGACTATGCTGATGCTCCTTTCGTTTGC 1272 48.19 MGKKAVLIGCNYSGTKAELKGCINDVKRMYQCLIDRYGFSEDDVTVLIDTDDSYTQPTGKNIRAALAHLVGSAEAGDVLFVHYSGHGTRLPAETGEEDDTGYDECIVPCDMNLITDEDFKELVEKVPEDCRLIIVSDSCHSGGLIQNTKEQIGESTKRLDEEEEEPSSHFGFRSFLHQTAQSALESRGIQLPSALRHVHRHHNPDEEESAREVDIGYEGGGYVKNRSLPLSTLIEILKQKTGKDDIDVGKLRPSLFDIFGEDSSPKVKKFMKVIMTKLQHGEGENEGGGSSGMFGMIGNLAQEFLKQKLEENNEDYAKPAMETDVGGKEEVYAGATKRSFPHNGILISGCQTDQTSADASPSGNSANAYGALSNAIQTILEESDGSVTYQELVLKARDKLKGQGFTQRPGLYCSDDYADAPFVC 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3824590 3826211 + Bma030974 Bma03g00487 79160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00487 424 Gene3D - 1 189 - -
Bma03g00487 424 Gene3D - 315 422 - -
Bma03g00487 424 PANTHER METACASPASE 4-RELATED 1 424 - -
Bma03g00487 424 PANTHER METACASPASE-4 1 424 - -
Bma03g00487 424 Coils Coil 145 165 - -
Bma03g00487 424 SUPERFAMILY Caspase-like 5 122 IPR029030 -
Bma03g00487 424 Pfam Caspase domain 3 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00474 Bma-Chr3:3635554 Bma03g00487 Bma-Chr3:3824590 0 dispersed
Bma03g00487 Bma-Chr3:3824590 Bma05g00592 Bma-Chr5:35850889 1.28E-18 dispersed
Bma03g00487 Bma-Chr3:3824590 Bma06g01263 Bma-Chr6:49745158 1.55E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00487 - - vvi:100241522 630.557