Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00488 ATGTTCCACCCAAAGAAGCCATCAACTATGAATTCTCATGATCAAAGATCTTCCATGTGTGTCCAAGGCGACTCGGGACTAGTTCTCACCACCGACCCGAAACCCCGCCTCCGGTGGACCGTCGAGCTCCATGCTCGCTTTGTCGATGCAGTCACCCAGCTTGGAGGCCCTGATACTTCTTCGTTAGAACTTCAACGAAACGTAGCATCTTCATCTAATGTTATTGGCCGCAATAAGAACGATAACTCGCACATGGTGGATGCAATTAAGATGCAGATGGAGGTGCAGAGAAGACTGCATGAACAACTAGAGGTGCAAAGACACCTTCAACTGAGAATCGAAGCACAAGGGAAGTACATGCAAAATATACTAGAAAAGGCTTGTCAAACTCTTGTCGGTGAGAATATGGGCTGTGGAGGATCGTCCTTTAAGACAATGGTTCCATGTTTTCAAGACCTGAACATTTGTGGAGGAGACCAGCTTGATCTGGAGCAAAATATAGATAATTTTCTTCCGGTCAATGACGATATTTGTCTAGAAAAGAAGGCAGGAAGCTCGTATAGCAACGGTGGAAAGAGCCCTCTTCTTTGGTCAGATGATCTTCAACTTCACATGTTGGGGCCGACGATGACTTCTTCTGGTGGTTTTAAAGGAGAGAGAGTCGTCGATCTAGACTCCATTTCTGATATCTATGACACAAAGCCATAG 708 45.62 MFHPKKPSTMNSHDQRSSMCVQGDSGLVLTTDPKPRLRWTVELHARFVDAVTQLGGPDTSSLELQRNVASSSNVIGRNKNDNSHMVDAIKMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQNILEKACQTLVGENMGCGGSSFKTMVPCFQDLNICGGDQLDLEQNIDNFLPVNDDICLEKKAGSSYSNGGKSPLLWSDDLQLHMLGPTMTSSGGFKGERVVDLDSISDIYDTKP 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3841540 3842897 - Bma016771.1 Bma03g00488 79161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00488 235 Gene3D - 33 115 - -
Bma03g00488 235 Pfam MYB-CC type transfactor, LHEQLE motif 85 130 IPR025756 -
Bma03g00488 235 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 59 206 - -
Bma03g00488 235 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 1 59 - -
Bma03g00488 235 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 59 206 IPR044848 GO:0003700
Bma03g00488 235 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 59 IPR044848 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00488 Bma08g00825 CCT
Bma03g00488 Bma12g00569 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00488 Bma-Chr3:3841540 Bma12g00569 Bma-Chr12:24779078 1.35E-62 dispersed
Bma03g00488 Bma-Chr3:3841540 Bma08g00825 Bma-Chr8:46047913 2.71E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00488 - - vri:117908572 292.737