Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma05g00866 AAGAGGATGGAGAGCAGAAGAGTTTGTGTTACTGGTGCTTCTGGCTTTATCGGTGCTTCGCTTGTCAAGAAGCTCTTGGAAAATGGCTTCACCGTCCACGCCACTCTCAGAAACCTAGAGGATAGATCAAAAGTAGGTCTCTTGAAATCTCTCCCCAATGCAGAGACCAAATTAGTGTTATTTCAAGCAGATATATATAACCCAGATGAGTTTTCTCCCGCTATTACTGGGTGCGAGTACGTATTTCACGTGGCGACGCCATTGCAGCACGATAGTCAAAGCTCCAAGTTCAAGAATACTTGCGAGGCTGCTGTTGCTGGAATGAAAAGTATTGCTGATTCTTGCATTCGATCGCAAACTGTCAAGCGGCTGATATACACTGCTTCTTGTGTCTCATTGTCGCCATTGAAAGAAGATGGAAATGGGTTTAAATCTTCCTATACGGACGAATCTTTTTGGACGCCCCTTGATATCTCCCTCACTAATTCCACTGAAGCTTTACTGGCATATACAAGATCAAAGACTTTAGCAGAGAAAGTGGCGCTGAGCTATAATGAGGTTGAAAATGCTAAACTGGAAGTAGTAACACTTGCTTGTGGCCTAACTGGAGGAGAAACTCTTGTTTCGTATTTGACGGGTAGTGTTCTAGTATTGTTATCTCCAATTACCGGCAATTTGGATATGTACAAGACGTTGAAATTCTTGCAAGAACTTTGGGGTTCGATTTTACTTGTTCATGTCGAGGATGTTTGTCAAGCGCATATCTTCTGCATGGAAAAGCCGTCCATGAAAGGAAGGTTCCTCTGTGCAGCTCTCAACCCAATCATTAAAGACATTGCAGTGTATTACAAAGAAAACTATCCCGAATCCCGCATCTCGGAAGAATTTATGGAGGAGCAAAAAGAGGCAATCAAGTTCGACGGATCGAAGTTGATGCAGATGGGATTCGAGTATAAATACGGTTTAAGCGACATAATCAATGACTGTGTGGCCTCGGCAAGGCGGCTTGGGGTCTCTCTTTCGACATAA 1029 43.44 KRMESRRVCVTGASGFIGASLVKKLLENGFTVHATLRNLEDRSKVGLLKSLPNAETKLVLFQADIYNPDEFSPAITGCEYVFHVATPLQHDSQSSKFKNTCEAAVAGMKSIADSCIRSQTVKRLIYTASCVSLSPLKEDGNGFKSSYTDESFWTPLDISLTNSTEALLAYTRSKTLAEKVALSYNEVENAKLEVVTLACGLTGGETLVSYLTGSVLVLLSPITGNLDMYKTLKFLQELWGSILLVHVEDVCQAHIFCMEKPSMKGRFLCAALNPIIKDIAVYYKENYPESRISEEFMEEQKEAIKFDGSKLMQMGFEYKYGLSDIINDCVASARRLGVSLST 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46208805 46211067 + Bma021985.1 Bma05g00866 82950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma05g00866 342 Pfam NAD dependent epimerase/dehydratase family 8 263 IPR001509 -
Bma05g00866 342 Gene3D - 2 341 - -
Bma05g00866 342 CDD FR_SDR_e 8 316 - -
Bma05g00866 342 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 332 - -
Bma05g00866 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 332 IPR036291 -
Bma05g00866 342 PANTHER ANTHOCYANIDIN REDUCTASE-LIKE 5 332 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00866 Bma14g00556 CCT
Bma05g00866 Bma14g00556 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01085 Bma-Chr2:52572124 Bma05g00866 Bma-Chr5:46208805 1.30E-104 dispersed
Bma05g00866 Bma-Chr5:46208805 Bma11g00355 Bma-Chr11:3779129 8.87E-60 dispersed
Bma05g00866 Bma-Chr5:46208805 Bma02g01092 Bma-Chr2:52651151 3.71E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma05g00866 - - csin:114258680 428.328