Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00093 ATGGACTTTCCTCATTCTGCCCAACATCACCCTTTAATGGCATTTTTCTGCCACTGCCATCATCAGTCTCGTCGGACTTTGTTTATGCTAGCTGTTTTCCTAATTGGGCATGGAGCTTCAGGAGCGACGTTCACATTTGTGAACAACTGCGAGTTTACAGTATGGCCGGGAATCCTTGGTAGCCCAAAACTAGATAGTACAGGCTTTGAGCTAGAAAAGGGCGGATCCCGCTCTTTCCAAGCTCCGTCCGGCTGGTCCGGCCGATTCTGGGGTCGAACCAGCTGCAACTTCGACGCGTCAGGCCGTGGCGTCTGCGCCACTGGAGACTGTGGATCCGGCGAGGTCGAGTGCAATGGGGCCAGCGCTACTCCTCCGGCGACGCTGGCTGAGTTTACACTTGGCTCCGGTTCGCAGGATTTCTACGACGTTAGCCTCGTTGACGGATATAACCTACCAATGACCGTCGAAGGAACGGGCGGGTCGGGTCCGTGCGAAACCACGGGTTGCGTATCGGACCTCAACCAGCAGTGCCCGACGGAATTGAGAGCGGAAGGCGGTGGTGCATGTAGAAGTGCGTGCGAAGCATTTGGGACGGAGGAGTACTGTTGTAGCGGCGCGTATAATTCTCCGGCCATTTGTAAACCTTCAATGTACTCGCAGATGTTCAAATCTGCCTGCCCAAAATCATATAGCTACGCTTACGACGACGCCACCAGCACATTTACCTGCACCGGAGCAGATTATACAATCACATTTTGCCCTTCTTCTCCAAGTCTGAAGTCTGCGAGGGATTCATCGGCGATGATGGCCGGAGGGACGACCGGAGATGCCACGGGATCAGTCCCAGGTGCAGCAGAACAGACATCTTCGACTAACATTGCTTTGCTAGCCAATTTGGCCACCGGCGACTCCAGCCGGGCAAAACCTTTAACAGCTTTTCATTCTGCATTGATTTTCGCCATTTCTCTCAGCCTCTCCTTCTTCCGTTCTCAGACTGTAACATTGAATTAG 1011 53.31 MDFPHSAQHHPLMAFFCHCHHQSRRTLFMLAVFLIGHGASGATFTFVNNCEFTVWPGILGSPKLDSTGFELEKGGSRSFQAPSGWSGRFWGRTSCNFDASGRGVCATGDCGSGEVECNGASATPPATLAEFTLGSGSQDFYDVSLVDGYNLPMTVEGTGGSGPCETTGCVSDLNQQCPTELRAEGGGACRSACEAFGTEEYCCSGAYNSPAICKPSMYSQMFKSACPKSYSYAYDDATSTFTCTGADYTITFCPSSPSLKSARDSSAMMAGGTTGDATGSVPGAAEQTSSTNIALLANLATGDSSRAKPLTAFHSALIFAISLSLSFFRSQTVTLN 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1413130 1414337 - Bma022711.1 Bma06g00093 83595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00093 336 ProSitePatterns Thaumatin family signature. 101 117 IPR017949 -
Bma06g00093 336 PANTHER OS03G0233200 PROTEIN 32 274 IPR001938 -
Bma06g00093 336 ProSiteProfiles Thaumatin family profile. 41 254 IPR001938 -
Bma06g00093 336 Pfam Thaumatin family 48 254 IPR001938 -
Bma06g00093 336 Gene3D Thaumatin 42 254 IPR037176 -
Bma06g00093 336 PANTHER THAUMATIN-LIKE PROTEIN 1 32 274 - -
Bma06g00093 336 SMART tha2 44 254 IPR001938 -
Bma06g00093 336 PRINTS Pathogenesis-related protein signature 101 130 IPR001938 -
Bma06g00093 336 PRINTS Pathogenesis-related protein signature 244 253 IPR001938 -
Bma06g00093 336 PRINTS Pathogenesis-related protein signature 67 76 IPR001938 -
Bma06g00093 336 PRINTS Pathogenesis-related protein signature 139 155 IPR001938 -
Bma06g00093 336 PRINTS Pathogenesis-related protein signature 43 55 IPR001938 -
Bma06g00093 336 PRINTS Pathogenesis-related protein signature 88 99 IPR001938 -
Bma06g00093 336 CDD TLP-PA 43 253 - -
Bma06g00093 336 SUPERFAMILY Osmotin, thaumatin-like protein 42 255 IPR037176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00958 Bma06g00093 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00772 Bma-Chr1:7105640 Bma06g00093 Bma-Chr6:1413130 6.62E-77 dispersed
Bma02g00227 Bma-Chr2:2387002 Bma06g00093 Bma-Chr6:1413130 1.92E-77 dispersed
Bma05g00106 Bma-Chr5:3341307 Bma06g00093 Bma-Chr6:1413130 1.50E-78 dispersed
Bma06g00093 Bma-Chr6:1413130 Bma15g00945 Bma-Chr15:34898244 1.77E-121 dispersed
Bma12g00924 Bma-Chr12:40819143 Bma06g00093 Bma-Chr6:1413130 2.65E-61 dispersed
Bma12g00929 Bma-Chr12:40953388 Bma06g00093 Bma-Chr6:1413130 1.10E-61 dispersed
Bma14g00585 Bma-Chr14:6356268 Bma06g00093 Bma-Chr6:1413130 6.01E-54 dispersed
Bma02g00717 Bma-Chr2:30890504 Bma06g00093 Bma-Chr6:1413130 3.37E-56 transposed
Bma01g02374 Bma-Chr1:81385966 Bma06g00093 Bma-Chr6:1413130 4.00E-93 wgd
Bma03g00958 Bma-Chr3:10178704 Bma06g00093 Bma-Chr6:1413130 1.51E-72 wgd
Bma05g00168 Bma-Chr5:4778220 Bma06g00093 Bma-Chr6:1413130 7.88E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00093 - - qsu:112033406 454.907