Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01269 ATGAAGGGGAGATTGGTTGGCGTCTCAGAGGAGACCACTACTGGAGTGAAGAGGCTGTATCAGATGCAGGCTAATGGTACCTTGTTGTTTCCCGCTATCAATGTCAATGATTCCGTTACCAAGAGCAAGTTTGACAACTTGTACGGATGCCGCCACTCACTCCCAGATGGTCTGATGAGAGCAACAGACGTGATGATTGCAGGCAAGGTAGCGGTTGTGTGTGGCTACGGAGATGTAGGGAAGGGCTGCGCTGCCGCACTCAAGCAAGGCGGATCTCGGGTCATCGTGACAGAAATTGATCCAATCTGTGCTCTCCAGGCTCTAATGGAAGGCTTCCAAGTTTTGACATTAGAGGACGTAGTAGCAGAAGCGGACATCTTCGTCACCACCACAGGCAACAAGGACATAATCATGTTGAGCCACATGAGGAAGATGAAGAACAACGCCATAGTTTGCAACATTGGCCACTTCGACAATGAGATCGATATGCAAGGACTGGAGAACTACCCAGGTGTGAAGCGCATCACCATTAAGCCTCAAACAGACAGGTGGGTCTTTCCCGACACTAAATCTGGCATCATTGTGCTGGCGGAGGGGCGGCTCATGAACCTGGGTTGCGCCACAGGCCACCCGAGCTTTGTAATGTCGTGCTCTTTCACAAACCAGGTGATTGCACAACTTGAACTGTGGAAGGAGAAGGGAAGTGGGAAATATGAGAAGAAGGTCTACGTTTTGCCTAAGCACCTAGATGAGAAGGTTGCGTCTCTTCACCTTGGCAAGCTAGGGGCTAGGCTCACCAAGCTCTCCAAGGACCAGGCTGACTATATTAGTGTGCCCGTTGAAGGTCCATATAAGCCTGCTCATTACAGGTATTGA 876 50.34 MKGRLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQGGSRVIVTEIDPICALQALMEGFQVLTLEDVVAEADIFVTTTGNKDIIMLSHMRKMKNNAIVCNIGHFDNEIDMQGLENYPGVKRITIKPQTDRWVFPDTKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKGSGKYEKKVYVLPKHLDEKVASLHLGKLGARLTKLSKDQADYISVPVEGPYKPAHYRY 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49798578 49799850 - Bma024377.3 Bma06g01269 84771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01269 291 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 46 209 IPR015878 -
Bma06g01269 291 SMART AdoHcyase_NAD_2 46 209 IPR015878 -
Bma06g01269 291 CDD SAHH 1 279 IPR000043 -
Bma06g01269 291 PANTHER ADENOSYLHOMOCYSTEINASE 1 291 - -
Bma06g01269 291 PANTHER ADENOSYLHOMOCYSTEINASE 1 291 IPR000043 -
Bma06g01269 291 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 68 85 IPR020082 -
Bma06g01269 291 SMART AdoHcyase_2 1 290 IPR000043 -
Bma06g01269 291 Gene3D - 205 263 IPR042172 -
Bma06g01269 291 Pfam S-adenosyl-L-homocysteine hydrolase 4 290 IPR000043 -
Bma06g01269 291 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 4 291 - -
Bma06g01269 291 Gene3D - 52 204 - -
Bma06g01269 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 209 IPR036291 -
Bma06g01269 291 Gene3D - 1 51 IPR042172 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g01300 Bma06g01269 CCT
Bma04g01161 Bma06g01269 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01300 Bma-Chr5:52315544 Bma06g01269 Bma-Chr6:49798578 0 dispersed
Bma06g01269 Bma-Chr6:49798578 Bma04g01161 Bma-Chr4:29994211 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01269 K01251 - sspl:121796106 564.688