Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01458 ATGGAGAAGAAAGAAGAGGCTAAAACTGAGAATTCCAGTATGGCAAATTCATCCCTCATGTTCTCCGATGAGATGCCGGCGACCTTTGCTTTATCTGGCATCTTCGACATCCCATGTGAGAACAAAAATCAATCCTTAGGCTTTTTCGATATGATGGGTATCGAAGATTACAGTGAATCCTTATTCGATGTCTTTTCAATGCCGTTGTTGGCGCCGGAACCGCCTTCTACCGTCCCGGAGTCATCGGAGGTGCTGAATACTCCAGCGACGCCTAACTCTCCTACAATTTCTTCATCCTCCAACGAAGCGGCGAATGATGAACAGACAAAAGCTGGAGACGAGGATGAGCAAGATCACGAAAAGGCTAATAAACATTTGAAAACGAAGAAGAAGAAGCAGAAACGGCAGAGAGAGCCGAGATTTGCGTTTATGACGAAGAGCGAAGTCGACCAGTTAGACGATGGCTACCGATGGCGGAAATACGGACAGAAGGCTGTAAAAAACAGCCCCTATCCGAGTTGTTCGTTTTCGGTGCATTATCTTGATTACATTCCTAATAGCTGCTGGCGGTGTCTTTGTTTTAGGTACAAAGGCTTCAATGAATATGCTAGATCGAAAAGAATTGATGTTAGCTCACCTGTCGGACTCGATATTCTTGTTGATGGAACAGTTCCTACAGGCTCTGGTCTGTCAAGCTCTGCAGCATTTGTTTGCTCGTCTACTATAGCCATAATGGCTGCGTTCGATGTGAATTTTCCTAAGTTGTTAAGAACGATGAATTATTGGTTGTCTGGTATGCAAGGGACTACAAAATTTTCAACAAATTGTGAAAATAGATTTGTATGTTGTTTAAAACAGAAAGAAATTGCCCAGCTTACATGTGAATGTGAGAGACACATTGGTACACAATCCTGCGGAATGGATCAGGCAATTTCAGTGATGGCCAGATCTGGGTTTGCAGAGCTGATTGATTTTAATCCGATCCGAGCCACTGATGTGAAACTTCTGGCCGGTGGAACTTTTATCATAGCTCATGCTTTGGCGGAATCGCAGCAAGCAGTCACGGCTGCTACAAATTACAATAACAGAGTTGTCAAATGTCAGCTTTCTGCAATCGTTCTTGGGATAAAGCTCGGAATGAAACCAAATGAAGCGATATCAAAAGTGAAAACAGCCCTATTGAAGGAAGAACCTTATACTGCTGAAGAGATCGAGGAAATCACCGAGGAAAATCTATCATCGGTCTTGAGCGATTCTCTGACATTGTTGGATGTGTTGAAAGCCGCAAAGCCCTTCAAGTTGCATCAGGTACTTACCTTATATTTCTGTCATGAAAATTGTTCTTTATTTTTATTAAAATATATTTTTCAGAGAGCCTCTCATGTCTACTCCGAAGCCAGAAGAGTGTACTGCAGTGTCCTCTACGAGTGCAGCTGTCCGGAGTTGGAAGAACTGTTTAATATATGCCGAGAAAATGGTGCGTTCGGGGTAAGGCTGACCGGAGCCGGATGGGGAGGTTGTGCAGTTGCTTTGGTTAAAGAGAGCATAGTTCCTAAGTTTATCCTTAATTTGAAGGAAAGCTTCTACCAATCAAGGATTGATAAAGGGATCATCGACAACAATGATCTTGGTCTCTACATCTTTGCTTCAAAGCCTTCAAGTGGAGCTGCAATATTCAAGTTTTAG 1686 42.94 MEKKEEAKTENSSMANSSLMFSDEMPATFALSGIFDIPCENKNQSLGFFDMMGIEDYSESLFDVFSMPLLAPEPPSTVPESSEVLNTPATPNSPTISSSSNEAANDEQTKAGDEDEQDHEKANKHLKTKKKKQKRQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPSCSFSVHYLDYIPNSCWRCLCFRYKGFNEYARSKRIDVSSPVGLDILVDGTVPTGSGLSSSAAFVCSSTIAIMAAFDVNFPKLLRTMNYWLSGMQGTTKFSTNCENRFVCCLKQKEIAQLTCECERHIGTQSCGMDQAISVMARSGFAELIDFNPIRATDVKLLAGGTFIIAHALAESQQAVTAATNYNNRVVKCQLSAIVLGIKLGMKPNEAISKVKTALLKEEPYTAEEIEEITEENLSSVLSDSLTLLDVLKAAKPFKLHQVLTLYFCHENCSLFLLKYIFQRASHVYSEARRVYCSVLYECSCPELEELFNICRENGAFGVRLTGAGWGGCAVALVKESIVPKFILNLKESFYQSRIDKGIIDNNDLGLYIFASKPSSGAAIFKF 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51257200 51265384 - Bma024572.2 Bma06g01458 84960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01458 561 Gene3D - 359 473 - -
Bma06g01458 561 PRINTS Mevalonate kinase family signature 222 244 - -
Bma06g01458 561 PRINTS Mevalonate kinase family signature 496 513 - -
Bma06g01458 561 Gene3D - 130 346 IPR014721 -
Bma06g01458 561 SUPERFAMILY Ribosomal protein S5 domain 2-like 213 334 IPR020568 -
Bma06g01458 561 PANTHER BNAA01G32760D PROTEIN 280 470 - -
Bma06g01458 561 PANTHER BNAA01G32760D PROTEIN 192 254 - -
Bma06g01458 561 PANTHER BNAA01G32760D PROTEIN 393 560 - -
Bma06g01458 561 SUPERFAMILY GHMP Kinase, C-terminal domain 351 557 IPR036554 -
Bma06g01458 561 SUPERFAMILY WRKY DNA-binding domain 144 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma06g01458 561 Pfam WRKY DNA -binding domain 153 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma06g01458 561 MobiDBLite consensus disorder prediction 73 142 - -
Bma06g01458 561 Gene3D - 474 535 IPR036554 -
Bma06g01458 561 ProSitePatterns GHMP kinases putative ATP-binding domain. 224 235 IPR006203 GO:0005524
Bma06g01458 561 ProSiteProfiles WRKY domain profile. 147 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma06g01458 561 PRINTS Galactokinase signature 215 233 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Bma06g01458 561 PRINTS Galactokinase signature 457 471 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Bma06g01458 561 MobiDBLite consensus disorder prediction 107 123 - -
Bma06g01458 561 Pfam GHMP kinases N terminal domain 217 314 IPR006204 GO:0005524
Bma06g01458 561 PANTHER MEVALONATE KINASE/GALACTOKINASE 280 470 - -
Bma06g01458 561 PANTHER MEVALONATE KINASE/GALACTOKINASE 192 254 - -
Bma06g01458 561 PANTHER MEVALONATE KINASE/GALACTOKINASE 393 560 - -
Bma06g01458 561 Coils Coil 116 136 - -
Bma06g01458 561 Pfam GHMP kinases C terminal 476 529 IPR013750 -
Bma06g01458 561 SMART WRKY_cls 152 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma06g01458 561 MobiDBLite consensus disorder prediction 79 106 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00935 Bma06g01458 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01458 Bma-Chr6:51257200 Bma10g00947 Bma-Chr10:20283799 8.23E-40 dispersed
Bma02g00937 Bma-Chr2:49246885 Bma06g01458 Bma-Chr6:51257200 1.80E-174 transposed
Bma02g00949 Bma-Chr2:49433254 Bma06g01458 Bma-Chr6:51257200 1.08E-174 transposed
Bma02g00935 Bma-Chr2:49202332 Bma06g01458 Bma-Chr6:51257200 6.49E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57541 PF00288 GHMP_kinases_N 3.50E-10 CL0329 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01458 K18674 - zju:107404688 452.595