Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01310 ATGGAGTTTTCATGCAGTCCCTTATTTCACGTAGCACTGTTATTGCTCTCGTTTTCATATGTTGACGTCTGTCTCGGACAAGATTACGACAACGATGACGCGGCCGCTCCTCCGCCGGGGCAGAACGACTGCGATGGCATTTTCCTGTCCTACACTTTCATTTCTCGGCAGAAAGAATATCCACACGTGAAAAACGTGTCCGGCCAATCGTGGGCATTCAAGTCTCAGGCGACGATACTGAATGCCGGGTCTACCGAGCTCAAAGCGTGGAAAATGTTCATCGGCTTCCAACACCGAGAGATATTGGTTTCCGTTAGTTCCGCCGTTGTAGTTGACGGCGATGACTTCCCGGCAGTAGTCGGGAATGGGACGACACTAGCGGGATACCCACAGGCGGATTTAATGACTTCCATTGATACAGCAGGAGACCTTGATCAAATTCAGGTGAAGATAGAATTGACAGGAACGCAGTTCGGGGTGAAACCCCCCGGAGTTCCGATGCCGGCGACTATTCGGCTCGTCAACGACGGGTTCAGGTGCCCAGCTGTTCATCATCACGGGACAAGCTCAATGTACGTTTGCTGCAAAAAAGACCCAAAATTCAAAGCAAAAAACACCCAGAAAACAAAATTCTTGCCCAGGCAGAACGGCGATCTCTCTATTTCATATGATGTTATTCAAGCCTATGGAAGTAGCTATCTAGGACAGGTCACGATCGAGAACCAAAACCCGTTAGGCCGGCTCGATAAGTGGAACTTGACATGGGAGTGGATGAAAGGAGAGTTCTCTGCATATTACAACGACTCAGTAATTCCGTGCAATACTTGTTCTTGCGGCTGCGAAGAAGACGACTCGAAAACTTGCAATCCCGAGGCTCGAGCTTTGCTCCTCCCTGCAGAAGCTCTTCTCGTCCCATTCGAAAACAGAACGGTAAAGGCAAAAGCCTGGGCTAAGCTAAAGCACTTTACTCTCCCGAAGAAACTGCCTTGCTCGGATAATTGTGGAGTTTCCATCAACTGGCACGTCAACTCCGATTATCGGAGCGGATGGCTGAATGCTCCGATCAAAACCCTCTCTAATGGAGATTCTGTCTTCAAACTAGAACAATCAGGTCCACATTACTTCATAAGTGGAAGTAAAGAGAACTGCAAGAAAAATGAAAAGTTGGTAGTGGTTGTTTTAGCTGATAGAACCAACCACTCTTCCACTTCTCCTCCTCCCTCTGACTTCACCGGCAACACCCCCTCTCCGACACCATCCGGCGAAGAGTCTCCAAATCCACCGCCCGGAACCTGGGAGATCAACCCAACTCCGTCGCCAGTATCAGAACCACCACCAAACGGGGCGTCATCAGCCATTGTCAGTTTCCTTGGTTGCTTTGCAGCACTTGCTTGTTCGTCTCTAGTTCTAGTCTTCTAG 1419 49.26 MEFSCSPLFHVALLLLSFSYVDVCLGQDYDNDDAAAPPPGQNDCDGIFLSYTFISRQKEYPHVKNVSGQSWAFKSQATILNAGSTELKAWKMFIGFQHREILVSVSSAVVVDGDDFPAVVGNGTTLAGYPQADLMTSIDTAGDLDQIQVKIELTGTQFGVKPPGVPMPATIRLVNDGFRCPAVHHHGTSSMYVCCKKDPKFKAKNTQKTKFLPRQNGDLSISYDVIQAYGSSYLGQVTIENQNPLGRLDKWNLTWEWMKGEFSAYYNDSVIPCNTCSCGCEEDDSKTCNPEARALLLPAEALLVPFENRTVKAKAWAKLKHFTLPKKLPCSDNCGVSINWHVNSDYRSGWLNAPIKTLSNGDSVFKLEQSGPHYFISGSKENCKKNEKLVVVVLADRTNHSSTSPPPSDFTGNTPSPTPSGEESPNPPPGTWEINPTPSPVSEPPPNGASSAIVSFLGCFAALACSSLVLVF 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48663140 48666989 - Bma026586.1 Bma07g01310 86447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01310 472 Gene3D - 306 406 IPR008972 -
Bma07g01310 472 MobiDBLite consensus disorder prediction 398 419 - -
Bma07g01310 472 PANTHER COBRA-LIKE PROTEIN 7 262 351 - -
Bma07g01310 472 PANTHER COBRA-LIKE PROTEIN 7 11 262 - -
Bma07g01310 472 MobiDBLite consensus disorder prediction 398 447 - -
Bma07g01310 472 MobiDBLite consensus disorder prediction 420 445 - -
Bma07g01310 472 Pfam Plastocyanin-like domain 312 385 IPR003245 GO:0009055
Bma07g01310 472 SUPERFAMILY Cupredoxins 341 395 IPR008972 -
Bma07g01310 472 Pfam COBRA-like protein 233 264 IPR006918 GO:0010215|GO:0031225
Bma07g01310 472 PANTHER COBRA-LIKE PROTEIN 7 11 262 - -
Bma07g01310 472 PANTHER COBRA-LIKE PROTEIN 7 262 351 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01310 Bma13g01035 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01310 Bma-Chr7:48663140 Bma12g00729 Bma-Chr12:33309745 4.19E-14 dispersed
Bma13g01035 Bma-Chr13:42938329 Bma07g01310 Bma-Chr7:48663140 1.36E-32 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01310 - - csv:101216608 370.548