Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00524 ATGGCGGACGAGTTTCAAACTAGTGGAAGCTGGTGGGAGTCGTCCAGAAACAGGTTTGAAAGAGGGATATCCCCGCCTTCTTCAGCTCTGAGTAGCTTAGGGAGCTTCGGGTGGCCTCCAGAAATGGCGGATATGAAAGCAAGGTCGTCAATGGAGTCTGTTTCAGTTTCCAGCAGTTCTTCTTTCGTCTTCCATGATACCCAGAAGTTTCAAGATTCTGATTCCTCAGCCGTTGATCCAAATTTGCAGATGATGGGTTTAGGGCTTTCTTCCCCCACCATAGATTGGAACCAATCCTTACTTCTTGGAGAGAAGTCCGAAATGAGTTTCAGATCGATGCTTCAAGAAAATCTGAACTCAAATAGCAATTTTCACCAACAAAGTGGGCCAAATCAATGGAGAGACAGACTCTTTTCTGGAGATAATTCATCAGAAAACGAGTTTAAGCCATTAAATCGAGGTTTTTCGTTAGATCAACAGGAGTTTAGCGCTCACGATTATAGTGGAGTTGATACCACAGCGACATGTTTAGGGTTATCTTCGAGTTTTCAAATGGATTCATCAGCTCTGTATGGAAATCCAACTACGATTCTACAAGGTTTTGAAAATCAGAATCAGAAAAATTCAAACTCCATAGAATTCTCTTATGGAGCAAACTTTCTCAAGAATTCTAATGAATTTAAGCCTTCTTCTTGGTCTTCTTCTAAAGTTCCTCAGTTTTTGAGAGCTTTACCTCCTAAAAACCAGACCCACCATAGCCATTTGCACTTTTCTAACAACGCTCCCTTCTGGAATGCTTCAGAAGCCGCCATTAAAGACACCAAACCAAGCTTTTTTCCTTCTCTGCAAACACAATTCTACTCACAAAACTTCGAGGAAAAGCCTAAGAATATATCTGAAACACGTGATTCAGGAACTGTAATAAAGAGAAGTGGGAGCCAACAAAATTCCAAAAGGCCAAGAAGTGAAACGCCATCGCCATTGCCAGCTTTCAAGGTGAGAAAAGAAAAGATGGGGGACAGAGTCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACTGCCTCAGTGCTTTCCGAAGCCCTTGACTACATCAAGTTCCTCCACGAACAAGTTAGTGTTTTAAGCACTCCATACATGAAAAGTGGAGCTGCAATACAACATCAACATAATTTAGACAAGTCCAAGGAGGCAGAAGGGCTGAAGCAAGATCTCAGAAGCCGAGGGCTGTGTTTAGTACCAGTTTCAAGCACATTCCCAGTGACTCACGAAAGCACGGTTGATTTTTGGACGCCAACATTTGGAGGAACATTCAGCTAA 1329 42.51 MADEFQTSGSWWESSRNRFERGISPPSSALSSLGSFGWPPEMADMKARSSMESVSVSSSSSFVFHDTQKFQDSDSSAVDPNLQMMGLGLSSPTIDWNQSLLLGEKSEMSFRSMLQENLNSNSNFHQQSGPNQWRDRLFSGDNSSENEFKPLNRGFSLDQQEFSAHDYSGVDTTATCLGLSSSFQMDSSALYGNPTTILQGFENQNQKNSNSIEFSYGANFLKNSNEFKPSSWSSSKVPQFLRALPPKNQTHHSHLHFSNNAPFWNASEAAIKDTKPSFFPSLQTQFYSQNFEEKPKNISETRDSGTVIKRSGSQQNSKRPRSETPSPLPAFKVRKEKMGDRVTALQQLVSPFGKTDTASVLSEALDYIKFLHEQVSVLSTPYMKSGAAIQHQHNLDKSKEAEGLKQDLRSRGLCLVPVSSTFPVTHESTVDFWTPTFGGTFS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6086778 6088989 - Bma004215.1 Bma10g00524 89587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00524 442 MobiDBLite consensus disorder prediction 301 323 - -
Bma10g00524 442 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 431 - -
Bma10g00524 442 CDD bHLH_AtbHLH_like 328 379 IPR045239 -
Bma10g00524 442 MobiDBLite consensus disorder prediction 290 330 - -
Bma10g00524 442 Gene3D - 332 398 IPR036638 GO:0046983
Bma10g00524 442 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 389 IPR036638 GO:0046983
Bma10g00524 442 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 7 431 - -
Bma10g00524 442 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 371 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00524 Bma13g00994 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00334 Bma-Chr7:4311921 Bma10g00524 Bma-Chr10:6086778 7.71E-85 dispersed
Bma10g00524 Bma-Chr10:6086778 Bma13g00994 Bma-Chr13:42094371 0 dispersed
Bma04g00857 Bma-Chr4:10845691 Bma10g00524 Bma-Chr10:6086778 1.60E-25 transposed
Bma10g00524 Bma-Chr10:6086778 Bma13g01005 Bma-Chr13:42313730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00524 - - jre:109014219 556.599