Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00638 GCTGCAATGGAAGACAATGTTGCTTTAAATGGATACTGGTTGGCTCCGAGTCCTAGCCCAAGAACATACTTCTCTGCAATGCTGGGTGAAGATGCCAGAGCAAGGCCGGTAATGGAATGTGGCAGTAATAATCAAACTGAGCAACTCTTTCCAAGACCTCAAGAGGAGAGGTTTTGGGAAGAGTCTATTTCGGAGAAGAAATCAAATTTGGGTAGGGGTCTTGGAGAAAGAATAGCAGCCAGAGCTGGCTTCAATGCTCCAAGATTAAACACACAAAGTATTACAACTTCTCATCTTTCAATGGACTCTGATGCGAAGTCACCCTACTTGACGGTTCCGCCGGGTCTTAGTCCGACGACTCTGCTCGATTCTCCGGTTTTTCTCTCGAATCCACTGGTTCAGCAGTCTCCAACCACCGGAAAATTGCCGTTTTTGACAAATGGTAACATTATGAGCTCCTCGTCAATGTCTGACGGCAATGATAGAAGCAAAGATAATCGTTTTGATGGTATCAATATGGCAGTACATAATACTACTCTCTCGCCAGATCAAAGATTTTTCGATGGCATTGACGAAGGCAAAGAACATTGTCCTCGACTCGAAGATCGACGGGATGAAGACGGAGAGCAAAATTTTCCCGGCATCGAGGTTTCCGTGGAATCCGAGAGTTCTCTTCAATCTAATTGTGCAGAACCATCCAAACGCTCGACTAAAGATCACGGAGGTTTTGCATCGGGAGATAATACTACTCTCTCGCCAGATCAAAGATTTTTCGATGGCATTGACGAAGGCAAAGAACATTGTCCTCGACTCGAAGATCGACGGGATGAAGACGGAGAGCAAAGAGGCAGTGGCAATTGTTTGGCCCCATCGGACGATGGATATAACTGGAGAAAATATGGACAAAAGCCGGTAAAAGGAAGCGAGTATCCCAGAAGTTACTATAAATGCACTCATCCAAATTGTCAAGTTAAGAAGAAGGTTGAACGGTCTCGTGAGGGGCACATAGCGGAGATCATTTATAAGGGTGCGCATAACCATCCTAAGTCGTCTTCAAATCGTCGAAACCCTCAAGGCGACGTCAATGAACAGCAGCAGAGTGGTGAAAATGATTTATTCTTGGCAAGCCAGCAAAAAGGGTCTTCCGCCGGAGCTCCTGATCTAAGGCATGACAACCTCGAGGAGACGTCATCGGCTTCGGTTGGTCCTGAATACATTAACCAATCCACCTCATTACAGCTTCAAAATGGCTCTCGCACTGAACAAGGCGATGCAGTTGACGCTTCCTCCACATTTTCCGACGAAGAAGATGAAGAGGATCGAGGAACTCATGGTAGCAAATCGTTGGGATATGACGGAGAAGGCGATGAATCTGAGTCGAAGAGAAGGAAAATCGAAGTTTTTGCAACTGAATCAAGCGGAGCTTCAAGAGCCATTCGAGAGCCACGAGTCGTCGTCCAGACGACCAGTGAAGTGGACATCCTCGATGATGGATATCGTTGGCGCAAATATGGACAAAAAGTGGTGAAAGGAAATCCAAATCCGAGGAGTTACTACAAATGTACCAGTGCGGGTTGCACTGTAAGAAAACACGCCGAGAGAGCGTCTCATGACCTCAAGTCAGTAATAACAACTTACGAAGGCAAGCACAATCACGCCGTTCCGGCTCGCCGCAATAGCAGTCATATGAACGCCAGAACTTATAGTGCTACGGCAGCTCAAGCTACTCCAACTGTTCAAAACCAGAGTCTCAGGCGAGAGCAGTCTCGAGATCATAATGGTATGGCTAAGTTTGACCGACCGCCGGCAGTTGGTCCCCCTGTCCATTGGTCATGTCATGGAATAAACCATCCTACCCTGCCGAACCTGGCAGTGCCAGTGTTGGGACCCGGCCAAGCCAAGATTCCGGTTCTGCCAATCAATCCTCACATAATGCATCATAGACAGGCTAACGAAATGGGGTTCGTACAGCCGAAAGGAGAATTGAAGGGGGAGCCAATGTCGGATGCTGTGTATCATCGCATAATGAGTAGGCTTCCACTTGGACCTCATTTATAA 2058 47.23 AAMEDNVALNGYWLAPSPSPRTYFSAMLGEDARARPVMECGSNNQTEQLFPRPQEERFWEESISEKKSNLGRGLGERIAARAGFNAPRLNTQSITTSHLSMDSDAKSPYLTVPPGLSPTTLLDSPVFLSNPLVQQSPTTGKLPFLTNGNIMSSSSMSDGNDRSKDNRFDGINMAVHNTTLSPDQRFFDGIDEGKEHCPRLEDRRDEDGEQNFPGIEVSVESESSLQSNCAEPSKRSTKDHGGFASGDNTTLSPDQRFFDGIDEGKEHCPRLEDRRDEDGEQRGSGNCLAPSDDGYNWRKYGQKPVKGSEYPRSYYKCTHPNCQVKKKVERSREGHIAEIIYKGAHNHPKSSSNRRNPQGDVNEQQQSGENDLFLASQQKGSSAGAPDLRHDNLEETSSASVGPEYINQSTSLQLQNGSRTEQGDAVDASSTFSDEEDEEDRGTHGSKSLGYDGEGDESESKRRKIEVFATESSGASRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHAERASHDLKSVITTYEGKHNHAVPARRNSSHMNARTYSATAAQATPTVQNQSLRREQSRDHNGMAKFDRPPAVGPPVHWSCHGINHPTLPNLAVPVLGPGQAKIPVLPINPHIMHHRQANEMGFVQPKGELKGEPMSDAVYHRIMSRLPLGPHL 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8786790 8789437 + Bma004358.1 Bma10g00638 89701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00638 685 MobiDBLite consensus disorder prediction 258 282 - -
Bma10g00638 685 SUPERFAMILY WRKY DNA-binding domain 487 555 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 MobiDBLite consensus disorder prediction 412 429 - -
Bma10g00638 685 Pfam WRKY DNA -binding domain 496 552 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 Pfam WRKY DNA -binding domain 292 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 MobiDBLite consensus disorder prediction 341 366 - -
Bma10g00638 685 MobiDBLite consensus disorder prediction 437 463 - -
Bma10g00638 685 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 602 IPR044810 GO:0003700
Bma10g00638 685 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 87 602 - -
Bma10g00638 685 SUPERFAMILY WRKY DNA-binding domain 290 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 MobiDBLite consensus disorder prediction 346 366 - -
Bma10g00638 685 MobiDBLite consensus disorder prediction 217 232 - -
Bma10g00638 685 Gene3D WRKY domain 284 350 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 Gene3D WRKY domain 482 548 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 ProSiteProfiles WRKY domain profile. 490 555 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 SMART WRKY_cls 291 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 SMART WRKY_cls 495 554 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 ProSiteProfiles WRKY domain profile. 286 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma10g00638 685 MobiDBLite consensus disorder prediction 217 300 - -
Bma10g00638 685 MobiDBLite consensus disorder prediction 412 463 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00638 Bma13g01146 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01196 Bma-Chr1:13603229 Bma10g00638 Bma-Chr10:8786790 1.69E-112 dispersed
Bma10g00638 Bma-Chr10:8786790 Bma13g01146 Bma-Chr13:44637853 0 dispersed
Bma10g00638 Bma-Chr10:8786790 Bma10g00588 Bma-Chr10:7220605 1.95E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57943 PF03106 WRKY 4.60E-23 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00638 K18835 - jre:108986136 758.444