Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00073 ATGGCAATGGAACTCCAAGGAGGAGTGCCAGAAAATCTTAAAAAACATCTCGCCCTTGCTGTTAGAAGCATCCAGTGGAGCTATGCAATTTTCTGGTCAAATTCAGCTCAACAACCAGGGGTCTTGGAGTGGGGTGATGGATTTTACAATGGAGATATTAAGACAAGAAAAACAGTTCAGGCTATGGAAATTGATGCTAATCAAATTGTTTTTCAAAGGAGCGAACAATTAAGAGAACTATACGAGTCTCTTTCTATAGAACAAGCAAGCCCCCAAGCTAAACGGCCTTCGGCCGCATTATCTCCCGAAGATCTCACTGATGCCGAATGGTATTACTTGGTTTGCATGTCCTTCATATTCAACACTGGACAAGGATTGCCGGGAACAACATATACCACTAGTCAACCCATCTGGCTATGCAATGCTCATGTTGCAGATAGCAAAATTTTCAGTCGCTCTCTGTTGGCGAAGTTTGGTTTTATCGTGCAGACTGTTGTGTGCTTTCCCTTTCTAGATGGTGTGGTGGAGCTTGGAGTGACTGATTTGGTCTTTGAGGATCCTAGCCTCATTCAACGCCTCAAAGCTTCTTTTTTGGATTCTCCGTTTTCATTGAGTTCTTCGGCCGTAGGTGAAAATATTCCGAGCACTGCACTTGATTGCAAGATCTTTGAAACTAAAGAAACATTGGCCGTACATCGTGCAGATCCTGATATGACTTCTCCAAGCAACGGTTCGAATCGAATGGAAAGCAATCAACTTGCAGAAGGCTCGATTGTTGGTGAGGGGAGAAGTAGAGGAGCTTCTCAAGCACAAAGCCGGCAAGGAACAACAAAAACACCTAGTAATAATACGAGGAAATCCCCACCGACGAAGAGGAAGGCTTGTGATGTGATAGAAATGGAGGAGACGTACGAAAGCTTGGACGAGTCGATAAACGTATATATAACCCACAAGGAAGTTATGATTAGACTGAGATGTGCTTGGAGAGATGGTGTTTTGCTAGATATCATGGATGTTATTAGCAATTTTCATTTAGATTCTCATTCAGTTCAGTCATCCACTACAGAAGGAATTCTTTCTCTTACGATCAAGGCGAAGTTCAATGCATTGCCTGTTGCGTCGGCTAGGACAATCCGACAAGCTCTCCGACGGATTGCCGGGAAATGTTGA 1170 43.59 MAMELQGGVPENLKKHLALAVRSIQWSYAIFWSNSAQQPGVLEWGDGFYNGDIKTRKTVQAMEIDANQIVFQRSEQLRELYESLSIEQASPQAKRPSAALSPEDLTDAEWYYLVCMSFIFNTGQGLPGTTYTTSQPIWLCNAHVADSKIFSRSLLAKFGFIVQTVVCFPFLDGVVELGVTDLVFEDPSLIQRLKASFLDSPFSLSSSAVGENIPSTALDCKIFETKETLAVHRADPDMTSPSNGSNRMESNQLAEGSIVGEGRSRGASQAQSRQGTTKTPSNNTRKSPPTKRKACDVIEMEETYESLDESINVYITHKEVMIRLRCAWRDGVLLDIMDVISNFHLDSHSVQSSTTEGILSLTIKAKFNALPVASARTIRQALRRIAGKC 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1284561 1287701 - Bma006943.1 Bma12g00073 91499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00073 389 MobiDBLite consensus disorder prediction 264 288 - -
Bma12g00073 389 MobiDBLite consensus disorder prediction 259 293 - -
Bma12g00073 389 PANTHER TRANSCRIPTION FACTOR EGL1 5 283 - -
Bma12g00073 389 PANTHER TRANSCRIPTION FACTOR EGL1 269 385 - -
Bma12g00073 389 PANTHER TRANSCRIPTION FACTOR TT8 5 283 - -
Bma12g00073 389 PANTHER TRANSCRIPTION FACTOR TT8 269 385 - -
Bma12g00073 389 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 13 197 IPR025610 -
Bma12g00073 389 MobiDBLite consensus disorder prediction 231 250 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma12g00073 Bma14g00608 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00957 Bma-Chr5:47819409 Bma12g00073 Bma-Chr12:1284561 3.31E-13 dispersed
Bma10g01010 Bma-Chr10:24745379 Bma12g00073 Bma-Chr12:1284561 2.67E-39 dispersed
Bma12g00073 Bma-Chr12:1284561 Bma07g00930 Bma-Chr7:34124281 2.48E-20 dispersed
Bma12g00073 Bma-Chr12:1284561 Bma14g00153 Bma-Chr14:2131378 2.75E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00073 - - pavi:110762528 339.732