Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01146 ATGGCGGGAATTGAAGAAAATGTTGCTTTGAGTGGAGACTGGCTGGCTCCCAGTCCCAGCCCAAGAACATTCTTCTCTGCAATGCTTGGTGAAGATTTAGGCTCAAGGTCTGCTGCAATGGAGTCTGGTAGGAATAATCAAGAGCCATTCTTTCTCAGACCTCAAGAGGAGAGGTTTATGGAAAACTCCATGGAGGGGACTCCACCTTCTTCGGCCGGGTTATCGCCATTTTCAGACCAGAAAGTGAATTTACGAGCCGGCCTCTGCGAAAGAATAGCAGCCAGAGCTGGATTCAATGCTCCAAGACTAAACACAGAAAGTATTAGAACTTCTGATCTTTTGCTGGATTCCGATATCAAGTCTCCGTTCTGGACGATTCCTCCTGGTCTCAGTCCGACTACTCTGCTCGATTCTCCAGTTTTTCTTTCAAATTCACTGGTTCAGCCATCTCCGACCACTGGAAAACTTCCGTTTTTTACAAGCGATAACATTATGAGCTCCTCTTTAATGTCGGAGACGGGTAATAGAAGTAAAGATCATCTCTTTAGCAGTATCAATACCAGTGAATTCCCCTCCATAGCCTTTAAGCCCGGAGATGATATGAGACCGCCTTTTGTTCTTGGTGCAATGGCTCTGACCACTCATCCGCAGCCATCTTGTCCGGCCGAGGCTTCAGTACAATCGGAGAGTTCTCTTAAATCTCACAGTGCAGAACTGTCTAAACCTCCGTCGAATGGTCATGGAGATTTTTCGCCGGATCAAAGATTCTTCGATTCTATCGATGAAGGCAACAAACATTCTCCGCCGCTCGGTGAGCGTCAAGATGAGGATGGAGAGCAAAGAGCCACCGAAGAGTCGGTGGTTCCGAATAATTGTGGTGCCCCGTCGGACGATGGATATAACTGGAGAAAATACGGACAGAAACAGGTAAAAGGAAGTGAGTATCCGAGAAGTTATTATAAATGCACTCATCCAAACTGTCAGGTTAAGAAGAAGGTCGAACGCTCCTACGAGGGCCACATAACCGAGATCATCTATAAGGGCGCACATAACCATCCGAAGCCTTCCCCAAATCGGTGTAATCCGATGCAAAAAGACATGCATGAACAGCCACAGAGTTGCGAAGCTGATCTACTCTGGACAAGCCTGCAAAAAGGGACTTTGGCTGGAGCTTCTGATTGGAGGAATGACAACCCCGAGGTAACATCATCGGCTTCGGTGGGTCCTGAATACGTCAATCAATCCACCTCTTTACAGCCTCAGAACGGCTCCCATTTTGAGCAAGGCGATGCAGTTGACGTTTCCTCTACGTTTTCCAACGACGAAGACGAAGAAGATCGAGGAACTCATGGGAGCGTGTCGATAGGCCATGATGGTGAAGGAGATGAATCCGAATCGAAGAGAAGGAAAATTGAAGTTTATGCAAGTGAAATGAGTGGAGCTTCACGAGCCATCCGAGAGCCTCGAGTCGTAGTCCAGACAACCAGTGAAGTAGATATTCTCGATGATGGATATCGTTGGCGTAAATACGGACAGAAAGTCAAGCAACTGCTTTTATGCAGGAGTTACTACAAGTGCACGGCTGCAGGCTGCACGGTGAGGAAACACGTCGAGAGAGCTTCTCACGACCTTAAATCAGTAATAACGACATACGAAGGAAAGCATAATCATGACGTGCCGGCTGCTCGTAATAGCAGCCACATGAACGCCCCCACTTCCGGCTCGGTGGCAGCTCAAGCTCCATCGACATTGATTCAAAACCACGGTCACCGGCCGGAGCCATCTCAAGCTCACAACGGAATGGCAAGGTTCGACAGACAACCACAACTTGGTCCGTTTGGCCTGGCCGGAAGGCAGCAGGTAGGCCACCCTCTCCCTGCCCATGGTTTCAGTTACGCAATGAACCACCCTCCGACCATGCCAAACCTGACTTTGCCTGTGGTGGGACCCCCCGGCCAAGTCAAGCTTCCGGTTCTACCGTTTCATCCTTACATGGCTCAGCATGGGCAAGGGGAGGAAATGAGGTTTGGGATGCCGAAAGGAGAAATGAAGGTGGAGCCGATGACCGAGGCTGTGTATCAGCAGATAATGAGTAGGCTTCCACTCGGACCTCACGTTTAA 2121 49.22 MAGIEENVALSGDWLAPSPSPRTFFSAMLGEDLGSRSAAMESGRNNQEPFFLRPQEERFMENSMEGTPPSSAGLSPFSDQKVNLRAGLCERIAARAGFNAPRLNTESIRTSDLLLDSDIKSPFWTIPPGLSPTTLLDSPVFLSNSLVQPSPTTGKLPFFTSDNIMSSSLMSETGNRSKDHLFSSINTSEFPSIAFKPGDDMRPPFVLGAMALTTHPQPSCPAEASVQSESSLKSHSAELSKPPSNGHGDFSPDQRFFDSIDEGNKHSPPLGERQDEDGEQRATEESVVPNNCGAPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSYEGHITEIIYKGAHNHPKPSPNRCNPMQKDMHEQPQSCEADLLWTSLQKGTLAGASDWRNDNPEVTSSASVGPEYVNQSTSLQPQNGSHFEQGDAVDVSSTFSNDEDEEDRGTHGSVSIGHDGEGDESESKRRKIEVYASEMSGASRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVKQLLLCRSYYKCTAAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHMNAPTSGSVAAQAPSTLIQNHGHRPEPSQAHNGMARFDRQPQLGPFGLAGRQQVGHPLPAHGFSYAMNHPPTMPNLTLPVVGPPGQVKLPVLPFHPYMAQHGQGEEMRFGMPKGEMKVEPMTEAVYQQIMSRLPLGPHV 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 44637853 44640528 - Bma010278.1 Bma13g01146 93875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01146 706 MobiDBLite consensus disorder prediction 254 283 - -
Bma13g01146 706 SUPERFAMILY WRKY DNA-binding domain 493 560 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 SUPERFAMILY WRKY DNA-binding domain 295 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 MobiDBLite consensus disorder prediction 216 300 - -
Bma13g01146 706 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 99 642 - -
Bma13g01146 706 ProSiteProfiles WRKY domain profile. 297 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 642 IPR044810 GO:0003700
Bma13g01146 706 SMART WRKY_cls 296 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 SMART WRKY_cls 501 559 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 MobiDBLite consensus disorder prediction 218 241 - -
Bma13g01146 706 Gene3D WRKY domain 486 561 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 Gene3D WRKY domain 283 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 MobiDBLite consensus disorder prediction 389 436 - -
Bma13g01146 706 MobiDBLite consensus disorder prediction 389 468 - -
Bma13g01146 706 Pfam WRKY DNA -binding domain 502 557 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 Pfam WRKY DNA -binding domain 297 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 ProSiteProfiles WRKY domain profile. 496 560 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g01146 706 MobiDBLite consensus disorder prediction 441 468 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00638 Bma13g01146 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00638 Bma-Chr10:8786790 Bma13g01146 Bma-Chr13:44637853 0 dispersed
Bma13g01146 Bma-Chr13:44637853 Bma14g01445 Bma-Chr14:27854253 2.95E-74 dispersed
Bma13g01146 Bma-Chr13:44637853 Bma10g00588 Bma-Chr10:7220605 1.19E-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58272 PF03106 WRKY 2.80E-24 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01146 K18835 - qsu:111999931 844.728