Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00556 ATGTCCGACTCCGTCCCCCAACTTGTTTGCGTCACCGGTGGTAGCGGCTGTATTGGGTCCTGGCTCGTCCGCCTCCTCCTCCTGCGCGGCTACTCTGTTCACGCCACTGTTCAAAATCTCAGAGATGAGAACGAAACGAAACATCTGGAAGCCCTTGAAGGAGCAGACCAGCGTCTCCGTCTCTTCCAAATCGAGCTACTGAACTATGACTCCATCCTTAAGGCTGTCTCTGGTTGTGTTGGCGTTTTTCACCTAGCCTCTCCTTGCATCGTTGATCGGGTCCAGCATCCTGAGAAGGAGCTCTTGGATCCGGCTATCAAAGGTACCATTAATGTCCTCACGGCGGCTAAAGAAGCAGGGGTCAAACGCGTGGTCGTCACTTCGTCTATCTCTGCCATTGTTCCAAGTCCTCACTGGCCTGCAGACGTTGTTAGGACAGAAGATTGTTGGACCGACATTGACTACTGTAAGGAGAAGGAATTATGGTACCCAATGTCAAAAACTCTGGCGGAAAAAGCTGCTTGGGAATTCGCCAAAGACAAGAATTTTGACGTTGTGGTTGTTAACCCTGGCACTGTGATGGGTCCTGTTATTCCTCCACGGCTTAACTCTAGCATGCTCATGCTTGTGCGTCTTCTCCAAGGGTGCACTGAGACATACGAAGGTTTCTTCATGGGATCGGTGCATTTTAAAGATGTAGCACTTGCACACATTTTGGTGTATGAAAACAAATCAGCCACAGGAAGACACTTGTGCGTCGAAGCAATATCTCATTATGGTGATTTTGCAGCCAAGGTTGCTGAACTCTACCCTGAATATAAGGTCCCAAGTTTGCCTAGAGATACTCAAGCTGGATTGGTGAGGTCCAAGAATGGAGCTAAGAAGCTGATGGATCTGGGTTTGGAGTTCACTGGAATGGAGGAAATCATCAAGGATGCGGTTGAGAGTTTGAAGAGCAATGGATTCATTGCTTGA 975 48.72 MSDSVPQLVCVTGGSGCIGSWLVRLLLLRGYSVHATVQNLRDENETKHLEALEGADQRLRLFQIELLNYDSILKAVSGCVGVFHLASPCIVDRVQHPEKELLDPAIKGTINVLTAAKEAGVKRVVVTSSISAIVPSPHWPADVVRTEDCWTDIDYCKEKELWYPMSKTLAEKAAWEFAKDKNFDVVVVNPGTVMGPVIPPRLNSSMLMLVRLLQGCTETYEGFFMGSVHFKDVALAHILVYENKSATGRHLCVEAISHYGDFAAKVAELYPEYKVPSLPRDTQAGLVRSKNGAKKLMDLGLEFTGMEEIIKDAVESLKSNGFIA 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5985010 5987046 - Bma010987.1 Bma14g00556 94537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00556 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 315 - -
Bma14g00556 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 317 IPR036291 -
Bma14g00556 324 CDD FR_SDR_e 9 301 - -
Bma14g00556 324 Gene3D - 1 324 - -
Bma14g00556 324 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 315 - -
Bma14g00556 324 Pfam NAD dependent epimerase/dehydratase family 9 248 IPR001509 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00866 Bma14g00556 CCT
Bma05g00866 Bma14g00556 ECH
Bma07g01579 Bma14g00556 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00270 Bma-Chr7:3285028 Bma14g00556 Bma-Chr14:5985010 2.82E-49 transposed
Bma12g00041 Bma-Chr12:961488 Bma14g00556 Bma-Chr14:5985010 6.24E-106 transposed
Bma12g00893 Bma-Chr12:40260477 Bma14g00556 Bma-Chr14:5985010 2.35E-72 transposed
Bma13g00671 Bma-Chr13:17026197 Bma14g00556 Bma-Chr14:5985010 5.25E-87 transposed
Bma14g01708 Bma-Chr14:36201608 Bma14g00556 Bma-Chr14:5985010 5.07E-66 transposed
Bma14g01728 Bma-Chr14:36695464 Bma14g00556 Bma-Chr14:5985010 2.34E-65 transposed
Bma14g00556 Bma-Chr14:5985010 Bma07g01579 Bma-Chr7:51119707 3.23E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00556 - - jre:108989884 551.592