Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g00556 | ATGTCCGACTCCGTCCCCCAACTTGTTTGCGTCACCGGTGGTAGCGGCTGTATTGGGTCCTGGCTCGTCCGCCTCCTCCTCCTGCGCGGCTACTCTGTTCACGCCACTGTTCAAAATCTCAGAGATGAGAACGAAACGAAACATCTGGAAGCCCTTGAAGGAGCAGACCAGCGTCTCCGTCTCTTCCAAATCGAGCTACTGAACTATGACTCCATCCTTAAGGCTGTCTCTGGTTGTGTTGGCGTTTTTCACCTAGCCTCTCCTTGCATCGTTGATCGGGTCCAGCATCCTGAGAAGGAGCTCTTGGATCCGGCTATCAAAGGTACCATTAATGTCCTCACGGCGGCTAAAGAAGCAGGGGTCAAACGCGTGGTCGTCACTTCGTCTATCTCTGCCATTGTTCCAAGTCCTCACTGGCCTGCAGACGTTGTTAGGACAGAAGATTGTTGGACCGACATTGACTACTGTAAGGAGAAGGAATTATGGTACCCAATGTCAAAAACTCTGGCGGAAAAAGCTGCTTGGGAATTCGCCAAAGACAAGAATTTTGACGTTGTGGTTGTTAACCCTGGCACTGTGATGGGTCCTGTTATTCCTCCACGGCTTAACTCTAGCATGCTCATGCTTGTGCGTCTTCTCCAAGGGTGCACTGAGACATACGAAGGTTTCTTCATGGGATCGGTGCATTTTAAAGATGTAGCACTTGCACACATTTTGGTGTATGAAAACAAATCAGCCACAGGAAGACACTTGTGCGTCGAAGCAATATCTCATTATGGTGATTTTGCAGCCAAGGTTGCTGAACTCTACCCTGAATATAAGGTCCCAAGTTTGCCTAGAGATACTCAAGCTGGATTGGTGAGGTCCAAGAATGGAGCTAAGAAGCTGATGGATCTGGGTTTGGAGTTCACTGGAATGGAGGAAATCATCAAGGATGCGGTTGAGAGTTTGAAGAGCAATGGATTCATTGCTTGA | 975 | 48.72 | MSDSVPQLVCVTGGSGCIGSWLVRLLLLRGYSVHATVQNLRDENETKHLEALEGADQRLRLFQIELLNYDSILKAVSGCVGVFHLASPCIVDRVQHPEKELLDPAIKGTINVLTAAKEAGVKRVVVTSSISAIVPSPHWPADVVRTEDCWTDIDYCKEKELWYPMSKTLAEKAAWEFAKDKNFDVVVVNPGTVMGPVIPPRLNSSMLMLVRLLQGCTETYEGFFMGSVHFKDVALAHILVYENKSATGRHLCVEAISHYGDFAAKVAELYPEYKVPSLPRDTQAGLVRSKNGAKKLMDLGLEFTGMEEIIKDAVESLKSNGFIA | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5985010 | 5987046 | - | Bma010987.1 | Bma14g00556 | 94537 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g00556 | 324 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 7 | 315 | - | - | |
Bma14g00556 | 324 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 7 | 317 | IPR036291 | - | |
Bma14g00556 | 324 | CDD | FR_SDR_e | 9 | 301 | - | - | |
Bma14g00556 | 324 | Gene3D | - | 1 | 324 | - | - | |
Bma14g00556 | 324 | PANTHER | CINNAMOYL-COA REDUCTASE-LIKE PROTEIN | 7 | 315 | - | - | |
Bma14g00556 | 324 | Pfam | NAD dependent epimerase/dehydratase family | 9 | 248 | IPR001509 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma05g00866 | Bma14g00556 | CCT | |
Bma05g00866 | Bma14g00556 | ECH | |
Bma07g01579 | Bma14g00556 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00270 | Bma-Chr7:3285028 | Bma14g00556 | Bma-Chr14:5985010 | 2.82E-49 | transposed | |
Bma12g00041 | Bma-Chr12:961488 | Bma14g00556 | Bma-Chr14:5985010 | 6.24E-106 | transposed | |
Bma12g00893 | Bma-Chr12:40260477 | Bma14g00556 | Bma-Chr14:5985010 | 2.35E-72 | transposed | |
Bma13g00671 | Bma-Chr13:17026197 | Bma14g00556 | Bma-Chr14:5985010 | 5.25E-87 | transposed | |
Bma14g01708 | Bma-Chr14:36201608 | Bma14g00556 | Bma-Chr14:5985010 | 5.07E-66 | transposed | |
Bma14g01728 | Bma-Chr14:36695464 | Bma14g00556 | Bma-Chr14:5985010 | 2.34E-65 | transposed | |
Bma14g00556 | Bma-Chr14:5985010 | Bma07g01579 | Bma-Chr7:51119707 | 3.23E-153 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g00556 | - | - | jre:108989884 | 551.592 |