Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01625 ATGGCGGATTGCAGAAACCTGAAGAATAACCGCACCCAGAAAACGGAGAAACCGTGGGGTGTTATCAGGGGCCTTTTCAGCTGCGGACATCTCCAGAATTCTGCTCGGCAAGGACTGTTGTGTAAGGAGAAGGAAGAAGAAGAATGGGTCAAGAAATGTAAGAAAGTGAAATGCCTTTCTAGTTCGCTTTGTAATAACACGAAGGTAATGCAAAGGCCTGAAACTGGGTCGCCGGAGGTTTACAAAAAAACGGCTTTAATGGCTTCCTCAAACAGCTACATTACCGATTCTTCTAGCTCTACCAGGTCTATGAAGTCTACTGTTTACGAACAAAACGGCGTCATTTCAACGTCTTTTTCTTCGTCTTCTTCTTCTGCAACTTCCATCGCCGCCTTCGGTGGGTCTTTCAGAGGAATACCTTTCAGAAAAATTTCTGGGTGTTACGAGTGTAAAATGGGGATCAACCCTGTCCTTGGATATACCAAAGATTCTTCTTTGAGATCAAGCATTTTTCCTTGTCCTCAATGTTGTGAGATTTTCGTGAAACCTGAAATTCTGGAGCTTCATCTGGCCATCAACCATGCTGGTATGACCAAATTCTTTCTTCTTGAAGCTATTTTGCTCTTCCTAAAAATAAAAATTGATCGTTTAGAAATACTATTTTCCTTTGGTTGCTTAGTATCTGAATTAGACGAAGAGGATACAAGCAAAAACATAGTGGAAATCATATTCAAATCAAGCTGGATGAAGAAGGAACCTCAAATATGCAAGATAGAACGAGTTCTAAAAGTCCACAACACTGAAAAAACCATTTCGAAATTCGAAGAGTACAGAGAGGCCATTAAAGCCAAAGCAACCAAGCTCCAGAAGAAACACCCCCGATGCCTTGCAGACGGAAACGAGCTTCTCCGGTTCCACTGCACCACCTTAACTTGCACCCTAGGCGTCAATGGCTGCTCCACTCTATGCCACTCGATCCATCCTCAGTGCAGTATCTGCAGCATCATAAGGAGCGGCTTCAGGGCAGCCGAGAAGGGAATTTTGACGATGGCAGCAAGTGTAGCAGCTCATGACAGAGCCGGGGAGGTGGTGGAAAGCAATGAGAAGAGGGCGATGGTGGTTTGCAGGGTGGTGGCCGGGAGGGTGAAGAGGAGCGGGGAAGGGAGCATGGAGGAGTATGACTCAGTGAGTGGAGGTATGGGAGTTTATTCTAATTTGGACGAGTTGTATGTGTTTAATGCCAAGGCTATACTGCCTTGTTTTGTTGTAATCTATCAAGGGTAA 1284 44.86 MADCRNLKNNRTQKTEKPWGVIRGLFSCGHLQNSARQGLLCKEKEEEEWVKKCKKVKCLSSSLCNNTKVMQRPETGSPEVYKKTALMASSNSYITDSSSSTRSMKSTVYEQNGVISTSFSSSSSSATSIAAFGGSFRGIPFRKISGCYECKMGINPVLGYTKDSSLRSSIFPCPQCCEIFVKPEILELHLAINHAGMTKFFLLEAILLFLKIKIDRLEILFSFGCLVSELDEEDTSKNIVEIIFKSSWMKKEPQICKIERVLKVHNTEKTISKFEEYREAIKAKATKLQKKHPRCLADGNELLRFHCTTLTCTLGVNGCSTLCHSIHPQCSICSIIRSGFRAAEKGILTMAASVAAHDRAGEVVESNEKRAMVVCRVVAGRVKRSGEGSMEEYDSVSGGMGVYSNLDELYVFNAKAILPCFVVIYQG 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19116278 19117561 + Bpe009472.1 Bpe02g01625 99774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01625 427 SUPERFAMILY ADP-ribosylation 227 426 - -
Bpe02g01625 427 ProSiteProfiles Zinc finger C2H2 type domain profile. 171 199 IPR013087 -
Bpe02g01625 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 21 426 - -
Bpe02g01625 427 ProSitePatterns Zinc finger C2H2 type domain signature. 173 194 IPR013087 -
Bpe02g01625 427 Gene3D - 226 426 - -
Bpe02g01625 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 21 426 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01625 Bpe04g00477 CCT
Bpe02g00078 Bpe02g01625 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01625 Bpe-Chr2:19116278 Bpe04g00246 Bpe-Chr4:1648146 1.32E-86 dispersed
Bpe02g00078 Bpe-Chr2:591296 Bpe02g01625 Bpe-Chr2:19116278 1.36E-129 wgd
Bpe02g01625 Bpe-Chr2:19116278 Bpe04g00477 Bpe-Chr4:3012432 1.60E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01625 - - qlo:115960248 445.277