Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01730 TTGAGGATACAAATGGCTTGCGAAAGAGTTTCGCTGCTCGTGTTCATGGGGAAGCTTTTGATAGCAGGAATATCTTCCACCACTTTTACTCTTTCAAATAAATGCGATTACTCTGTATGGCCGGGAATTCTCTCCAACGCCGGCGTACCGCCGCTTTCGACGACGGGCTTCGTTCTCCAAAAGGGGGAGTCCAAGACTATTTTCGCTCCCATCTCATGGGGCGGCCGATTCTGGGGCCGAACTCTTTGTTCCAACGAATCCTCTTCCGGCGAATTCTACTGCGTCACCGGTGACTGTGGCTCGGGAGAGATCGAATGCTCCGGTAAAGGCCCGACCCCTCCGGCTACTCTGGCTGAATTCACTCTCGACGGCCAGGATGGATTTGACTTTTTCGATGTCAGCTTGGTGGACGGCTATAACCTCCCTATGCTGGTGGCTCCTCAGAACGGAAGCGGAGAGAACTGTACCAACACCGGCTGCGTGGCGGATATCAATAGCGCGTGTCCTTCGGGGCTGAGAGTGACGGACGAGGATGGGAGAGAGGGCGTCGCCTGTAGAAGTGCATGCCAGGCTCTTGGGCAGCCGCAGTATTGTTGCAGCGGCGCGTATAATACACCGGATACTTGCAAGCCGTCGTCGTACTCCCAGTTTTTCAAAAAGGAATGCCCACGAGCATACAGCTATGCCTACGACGATAAGAGTAGCACCTTCACCTGCGTCGCCGCCGATTATGTCCTCACTTTCTGTGCCTCTCCAAACACGAGGTGA 768 54.3 LRIQMACERVSLLVFMGKLLIAGISSTTFTLSNKCDYSVWPGILSNAGVPPLSTTGFVLQKGESKTIFAPISWGGRFWGRTLCSNESSSGEFYCVTGDCGSGEIECSGKGPTPPATLAEFTLDGQDGFDFFDVSLVDGYNLPMLVAPQNGSGENCTNTGCVADINSACPSGLRVTDEDGREGVACRSACQALGQPQYCCSGAYNTPDTCKPSSYSQFFKKECPRAYSYAYDDKSSTFTCVAADYVLTFCASPNTR 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19741008 19741775 + Bpe009561.1 Bpe02g01730 99879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01730 255 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Bpe02g01730 255 Gene3D Thaumatin 27 250 IPR037176 -
Bpe02g01730 255 PIRSF PR5 1 255 IPR001938 -
Bpe02g01730 255 SUPERFAMILY Osmotin, thaumatin-like protein 27 250 IPR037176 -
Bpe02g01730 255 CDD TLP-PA 28 249 - -
Bpe02g01730 255 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Bpe02g01730 255 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Bpe02g01730 255 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Bpe02g01730 255 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Bpe02g01730 255 PANTHER OS03G0233200 PROTEIN 19 253 IPR001938 -
Bpe02g01730 255 SMART tha2 29 250 IPR001938 -
Bpe02g01730 255 ProSiteProfiles Thaumatin family profile. 26 249 IPR001938 -
Bpe02g01730 255 PANTHER BNAA02G17480D PROTEIN 19 253 - -
Bpe02g01730 255 Pfam Thaumatin family 33 249 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01730 Bpe04g00250 CCT
Bpe02g01730 Bpe04g00250 ECH
Bpe02g01730 Bpe05g00142 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01730 Bpe-Chr2:19741008 Bpe14g01332 Bpe-Chr14:10543774 1.96E-108 dispersed
Bpe10g00159 Bpe-Chr10:3831886 Bpe02g01730 Bpe-Chr2:19741008 3.48E-93 wgd
Bpe02g00343 Bpe-Chr2:2249606 Bpe02g01730 Bpe-Chr2:19741008 5.84E-58 wgd
Bpe02g01730 Bpe-Chr2:19741008 Bpe04g00250 Bpe-Chr4:1672685 6.80E-131 wgd
Bpe02g01730 Bpe-Chr2:19741008 Bpe05g00142 Bpe-Chr5:3708511 1.17E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01730 - - csv:101204094 395.201