Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g00733 | GCTGCAATGGAAGACAATGTTGCTTTAAATGGATATTGGTTGGCTCCGAGTCCTAGCCCTAGAACATACTTCTCTAAAATGCTGGGTGAAGATGCCAGGGCAAGGCCTGCAATGGAATGTAGCAGTAATGATCAAACTGAGCAACTCTTTCGAAGACCTCAAGAGGAGAGGTTTTGGGAAGAGTTTATTTCGGAGAAGAAATCAAATTTAGGTGGGGGTCTGGGCGAAAGAATAGCAGCCAGAGCTGGGTTCAATGCTCCAAGATTAAACACACAAAGCATTACAACTTCTCATCTTTCACTGGACTCTGATGTGAAGTCGCCTTACTTGACGGTTCCGCCGGGTCTTAGTCCGACGACTCTGCTCGATTCTCCGGTTTTTCTCTCGAATTCGCTGCAGTCTCCAACCACCGGAAAATTGCCATTTTTGACAAATGGTAACATCATGAGCTCCTCGTTAATGTCTGACGGCAATGATAGAAGCAAAGATAATCGTTTTGACGGAATCAATATGGCAGTAAGTAAATTAACATTAATGGCGCCGACCACTCTTCCCCAGCAAAATTTTCCCGGCATGGAGGTTTCCGTGGAATCCGATGGTTCTCTCCAATCTAATTGTGCAGAACCATCCAAACGTTCGACTAAAGATCATGGAGGTTTTGCATCGGGAAATAATACTACTCTCTCACCAGATCAAAGATTTTTCGATGGCATTGATGAAGGCAAAGAACATTGTCCTCAACTCGATGATCGACGGGATGAGGTAGGCGAGCAAAGAGGCAGTGGCAATTGTTTGGCCCCATCTGACGATGGATATAACTGGAGAAAATATGGACAAAAGCCGGTAAAAGGAAGCGAGTATCCCAGAAGTTACTATAAATGCACTCATCCAAATTGTCAAGTTAAGAAGAAGGTTGAAAGGTCTCATGAGGGGCACATAACGGAGATCATTTATAAGGGTGCGCATAACCATCCTAAGTCGTCTTCAAATCGTCGAAACCCTCAAGGCGATGTCAATGAACAGCAGCAGAGTGGTGAAAATGATTTATTCTTAGCAAGCGAGCAAAAAGGGTCCGCCGCCGGAGCTCTTGATCGAAGGCATGACAACCTCGAGGAGACGTCATCGGCTTTGGTTGGTCCTCAATACATTAACCAATCCACCTCATTACAGCTTCAAAATGGCTCTCGTACTGAACACGGTGATGCAGTTGATGTCTCCTCCGCATTTTCCAACGAAGAAGATGAAGAGGATCGAGGAACTCATGGTAGCAAATCGTTGGGAAACGACGGAGAAGGCGATGAATCTGAGTCGAAGAGAAGGAAAATTGAAGTTTTTGCAACTGAATCAAGCGGAGCTTCAAGAGCCATTCGAGAGCCACGAGTTGTCGTCCAAACGACAAGTGAAGTGGACATCCTCGATGATGGATATCGTTGGCGCAAATATGGACAAAAAGTGGTGAAAGGAAATCCAAATCCGAGGAGTTACTACAAGTGTACCAGTGCGGGCTGCACTGTAAGAAAACACGTCGAGAGAGCGTCTCACGACCTCAAGTCAGTAATAACAACTTATGAAGGCAAGCACAATCACGCTGTTCCAGCTGGCCGCAATAGCAGTCATATGAACGCTGGAACTTCTAGTGCTACGGCAGCTCGAGCTACTCCGACTGTTCAAAACCTGAGTCTCAGGGAAGAGATGTCTCAAGATCATAATGGGATGGCTAAGTTTGTCCGATCGCCGGCAGTTGGTCCCCCTGTCCATGGGTCAAGTCATGGAATGAACCATCCTACCCCGCCAAACCTGGGCATGCCAGTGTTGGGACCTGGCCAACCCAAGATTCCGGTCCTGCCAACCAATCCTTACATAATGCATCATAGACAGCATAGCGAAATGGGGTTCGTACTGCCGAAAGGAGAATTGAAGGGGAAGCCAATGTCAGATGCTGTGTATCATCGCATAATGAGTAGGCTTCCACTTGGACCTCATTTATAA | 1989 | 46.51 | AAMEDNVALNGYWLAPSPSPRTYFSKMLGEDARARPAMECSSNDQTEQLFRRPQEERFWEEFISEKKSNLGGGLGERIAARAGFNAPRLNTQSITTSHLSLDSDVKSPYLTVPPGLSPTTLLDSPVFLSNSLQSPTTGKLPFLTNGNIMSSSLMSDGNDRSKDNRFDGINMAVSKLTLMAPTTLPQQNFPGMEVSVESDGSLQSNCAEPSKRSTKDHGGFASGNNTTLSPDQRFFDGIDEGKEHCPQLDDRRDEVGEQRGSGNCLAPSDDGYNWRKYGQKPVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHPKSSSNRRNPQGDVNEQQQSGENDLFLASEQKGSAAGALDRRHDNLEETSSALVGPQYINQSTSLQLQNGSRTEHGDAVDVSSAFSNEEDEEDRGTHGSKSLGNDGEGDESESKRRKIEVFATESSGASRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHAVPAGRNSSHMNAGTSSATAARATPTVQNLSLREEMSQDHNGMAKFVRSPAVGPPVHGSSHGMNHPTPPNLGMPVLGPGQPKIPVLPTNPYIMHHRQHSEMGFVLPKGELKGKPMSDAVYHRIMSRLPLGPHL | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27429969 | 27432392 | + | Bpe012641.1 | Bpe03g00733 | 101238 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g00733 | 662 | Pfam | WRKY DNA -binding domain | 269 | 325 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | Pfam | WRKY DNA -binding domain | 473 | 529 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 408 | 440 | - | - | |
Bpe03g00733 | 662 | ProSiteProfiles | WRKY domain profile. | 467 | 532 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | SUPERFAMILY | WRKY DNA-binding domain | 267 | 326 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 252 | 277 | - | - | |
Bpe03g00733 | 662 | Gene3D | WRKY domain | 261 | 327 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 527 | 552 | - | - | |
Bpe03g00733 | 662 | SUPERFAMILY | WRKY DNA-binding domain | 464 | 532 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 79 | 582 | - | - | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 318 | 343 | - | - | |
Bpe03g00733 | 662 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 79 | 582 | IPR044810 | GO:0003700 | |
Bpe03g00733 | 662 | SMART | WRKY_cls | 472 | 531 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | SMART | WRKY_cls | 268 | 326 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 412 | 440 | - | - | |
Bpe03g00733 | 662 | Gene3D | WRKY domain | 459 | 525 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 194 | 209 | - | - | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 323 | 343 | - | - | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 194 | 231 | - | - | |
Bpe03g00733 | 662 | ProSiteProfiles | WRKY domain profile. | 263 | 327 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 217 | 231 | - | - | |
Bpe03g00733 | 662 | MobiDBLite | consensus disorder prediction | 534 | 552 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g00733 | Bpe09g00095 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01329 | Bpe-Chr2:16901401 | Bpe03g00733 | Bpe-Chr3:27429969 | 4.71E-114 | dispersed | |
Bpe03g00733 | Bpe-Chr3:27429969 | Bpe08g00052 | Bpe-Chr8:278046 | 8.40E-92 | dispersed | |
Bpe04g01294 | Bpe-Chr4:19204471 | Bpe03g00733 | Bpe-Chr3:27429969 | 5.99E-78 | transposed | |
Bpe03g00733 | Bpe-Chr3:27429969 | Bpe09g00095 | Bpe-Chr9:657603 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21117 | PF03106 | WRKY | 2.60E-24 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g00733 | K18835 | - | jre:108986136 | 761.14 |