Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00733 GCTGCAATGGAAGACAATGTTGCTTTAAATGGATATTGGTTGGCTCCGAGTCCTAGCCCTAGAACATACTTCTCTAAAATGCTGGGTGAAGATGCCAGGGCAAGGCCTGCAATGGAATGTAGCAGTAATGATCAAACTGAGCAACTCTTTCGAAGACCTCAAGAGGAGAGGTTTTGGGAAGAGTTTATTTCGGAGAAGAAATCAAATTTAGGTGGGGGTCTGGGCGAAAGAATAGCAGCCAGAGCTGGGTTCAATGCTCCAAGATTAAACACACAAAGCATTACAACTTCTCATCTTTCACTGGACTCTGATGTGAAGTCGCCTTACTTGACGGTTCCGCCGGGTCTTAGTCCGACGACTCTGCTCGATTCTCCGGTTTTTCTCTCGAATTCGCTGCAGTCTCCAACCACCGGAAAATTGCCATTTTTGACAAATGGTAACATCATGAGCTCCTCGTTAATGTCTGACGGCAATGATAGAAGCAAAGATAATCGTTTTGACGGAATCAATATGGCAGTAAGTAAATTAACATTAATGGCGCCGACCACTCTTCCCCAGCAAAATTTTCCCGGCATGGAGGTTTCCGTGGAATCCGATGGTTCTCTCCAATCTAATTGTGCAGAACCATCCAAACGTTCGACTAAAGATCATGGAGGTTTTGCATCGGGAAATAATACTACTCTCTCACCAGATCAAAGATTTTTCGATGGCATTGATGAAGGCAAAGAACATTGTCCTCAACTCGATGATCGACGGGATGAGGTAGGCGAGCAAAGAGGCAGTGGCAATTGTTTGGCCCCATCTGACGATGGATATAACTGGAGAAAATATGGACAAAAGCCGGTAAAAGGAAGCGAGTATCCCAGAAGTTACTATAAATGCACTCATCCAAATTGTCAAGTTAAGAAGAAGGTTGAAAGGTCTCATGAGGGGCACATAACGGAGATCATTTATAAGGGTGCGCATAACCATCCTAAGTCGTCTTCAAATCGTCGAAACCCTCAAGGCGATGTCAATGAACAGCAGCAGAGTGGTGAAAATGATTTATTCTTAGCAAGCGAGCAAAAAGGGTCCGCCGCCGGAGCTCTTGATCGAAGGCATGACAACCTCGAGGAGACGTCATCGGCTTTGGTTGGTCCTCAATACATTAACCAATCCACCTCATTACAGCTTCAAAATGGCTCTCGTACTGAACACGGTGATGCAGTTGATGTCTCCTCCGCATTTTCCAACGAAGAAGATGAAGAGGATCGAGGAACTCATGGTAGCAAATCGTTGGGAAACGACGGAGAAGGCGATGAATCTGAGTCGAAGAGAAGGAAAATTGAAGTTTTTGCAACTGAATCAAGCGGAGCTTCAAGAGCCATTCGAGAGCCACGAGTTGTCGTCCAAACGACAAGTGAAGTGGACATCCTCGATGATGGATATCGTTGGCGCAAATATGGACAAAAAGTGGTGAAAGGAAATCCAAATCCGAGGAGTTACTACAAGTGTACCAGTGCGGGCTGCACTGTAAGAAAACACGTCGAGAGAGCGTCTCACGACCTCAAGTCAGTAATAACAACTTATGAAGGCAAGCACAATCACGCTGTTCCAGCTGGCCGCAATAGCAGTCATATGAACGCTGGAACTTCTAGTGCTACGGCAGCTCGAGCTACTCCGACTGTTCAAAACCTGAGTCTCAGGGAAGAGATGTCTCAAGATCATAATGGGATGGCTAAGTTTGTCCGATCGCCGGCAGTTGGTCCCCCTGTCCATGGGTCAAGTCATGGAATGAACCATCCTACCCCGCCAAACCTGGGCATGCCAGTGTTGGGACCTGGCCAACCCAAGATTCCGGTCCTGCCAACCAATCCTTACATAATGCATCATAGACAGCATAGCGAAATGGGGTTCGTACTGCCGAAAGGAGAATTGAAGGGGAAGCCAATGTCAGATGCTGTGTATCATCGCATAATGAGTAGGCTTCCACTTGGACCTCATTTATAA 1989 46.51 AAMEDNVALNGYWLAPSPSPRTYFSKMLGEDARARPAMECSSNDQTEQLFRRPQEERFWEEFISEKKSNLGGGLGERIAARAGFNAPRLNTQSITTSHLSLDSDVKSPYLTVPPGLSPTTLLDSPVFLSNSLQSPTTGKLPFLTNGNIMSSSLMSDGNDRSKDNRFDGINMAVSKLTLMAPTTLPQQNFPGMEVSVESDGSLQSNCAEPSKRSTKDHGGFASGNNTTLSPDQRFFDGIDEGKEHCPQLDDRRDEVGEQRGSGNCLAPSDDGYNWRKYGQKPVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHPKSSSNRRNPQGDVNEQQQSGENDLFLASEQKGSAAGALDRRHDNLEETSSALVGPQYINQSTSLQLQNGSRTEHGDAVDVSSAFSNEEDEEDRGTHGSKSLGNDGEGDESESKRRKIEVFATESSGASRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHAVPAGRNSSHMNAGTSSATAARATPTVQNLSLREEMSQDHNGMAKFVRSPAVGPPVHGSSHGMNHPTPPNLGMPVLGPGQPKIPVLPTNPYIMHHRQHSEMGFVLPKGELKGKPMSDAVYHRIMSRLPLGPHL 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27429969 27432392 + Bpe012641.1 Bpe03g00733 101238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00733 662 Pfam WRKY DNA -binding domain 269 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 Pfam WRKY DNA -binding domain 473 529 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 MobiDBLite consensus disorder prediction 408 440 - -
Bpe03g00733 662 ProSiteProfiles WRKY domain profile. 467 532 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 SUPERFAMILY WRKY DNA-binding domain 267 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 MobiDBLite consensus disorder prediction 252 277 - -
Bpe03g00733 662 Gene3D WRKY domain 261 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 MobiDBLite consensus disorder prediction 527 552 - -
Bpe03g00733 662 SUPERFAMILY WRKY DNA-binding domain 464 532 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 79 582 - -
Bpe03g00733 662 MobiDBLite consensus disorder prediction 318 343 - -
Bpe03g00733 662 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 582 IPR044810 GO:0003700
Bpe03g00733 662 SMART WRKY_cls 472 531 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 SMART WRKY_cls 268 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 MobiDBLite consensus disorder prediction 412 440 - -
Bpe03g00733 662 Gene3D WRKY domain 459 525 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 MobiDBLite consensus disorder prediction 194 209 - -
Bpe03g00733 662 MobiDBLite consensus disorder prediction 323 343 - -
Bpe03g00733 662 MobiDBLite consensus disorder prediction 194 231 - -
Bpe03g00733 662 ProSiteProfiles WRKY domain profile. 263 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00733 662 MobiDBLite consensus disorder prediction 217 231 - -
Bpe03g00733 662 MobiDBLite consensus disorder prediction 534 552 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00733 Bpe09g00095 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01329 Bpe-Chr2:16901401 Bpe03g00733 Bpe-Chr3:27429969 4.71E-114 dispersed
Bpe03g00733 Bpe-Chr3:27429969 Bpe08g00052 Bpe-Chr8:278046 8.40E-92 dispersed
Bpe04g01294 Bpe-Chr4:19204471 Bpe03g00733 Bpe-Chr3:27429969 5.99E-78 transposed
Bpe03g00733 Bpe-Chr3:27429969 Bpe09g00095 Bpe-Chr9:657603 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21117 PF03106 WRKY 2.60E-24 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00733 K18835 - jre:108986136 761.14